Variant report

Variant	rs2298435
Chromosome Location	chr11:73136014-73136015
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:73124386..73125910-chr11:73135092..73137028,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs60784246	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3395161	chr11:73084616-73461577	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv530624	chr11:73114283-73646329	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:101 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:73099200-73139800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr11:73099200-73141000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr11:73115200-73149400	Weak transcription	Fetal Kidney	kidney
4	chr11:73118800-73137600	Weak transcription	Colonic Mucosa	Colon
5	chr11:73120800-73140600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr11:73120800-73141200	Weak transcription	Esophagus	oesophagus
7	chr11:73120800-73149000	Weak transcription	Fetal Lung	lung
8	chr11:73120800-73149800	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr11:73120800-73150000	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr11:73121000-73150200	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr11:73122400-73163200	Weak transcription	Aorta	Aorta
12	chr11:73122800-73139000	Weak transcription	Spleen	Spleen
13	chr11:73122800-73149600	Weak transcription	Gastric	stomach
14	chr11:73123800-73209600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr11:73124000-73140800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr11:73126600-73137400	Weak transcription	Rectal Smooth Muscle	rectum
17	chr11:73126600-73149400	Weak transcription	Small Intestine	intestine
18	chr11:73126800-73137200	Weak transcription	Colon Smooth Muscle	Colon
19	chr11:73127800-73136600	Weak transcription	Brain Angular Gyrus	brain
20	chr11:73127800-73137000	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr11:73127800-73137400	Weak transcription	Right Ventricle	heart
22	chr11:73128000-73137400	Weak transcription	Psoas Muscle	Psoas
23	chr11:73128200-73137400	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr11:73128400-73136800	Weak transcription	HSMM	muscle
25	chr11:73128400-73137200	Weak transcription	Muscle Satellite Cultured Cells	--
26	chr11:73128400-73137400	Weak transcription	NH-A	brain
27	chr11:73128600-73137200	Weak transcription	NHLF	lung
28	chr11:73128600-73139400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr11:73128600-73139400	Weak transcription	NHDF-Ad	bronchial
30	chr11:73129200-73137400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr11:73129400-73152400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr11:73129600-73136200	Weak transcription	GM12878-XiMat	blood
33	chr11:73129600-73140000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr11:73129600-73147000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr11:73129600-73149400	Weak transcription	Liver	Liver
36	chr11:73129600-73150000	Weak transcription	Fetal Intestine Small	intestine
37	chr11:73129800-73141200	Weak transcription	Fetal Brain Male	brain
38	chr11:73130400-73141200	Weak transcription	Pancreas	Pancrea
39	chr11:73130600-73139200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr11:73130600-73139400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr11:73130600-73141000	Weak transcription	Thymus	Thymus
42	chr11:73130800-73140000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr11:73130800-73140400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
44	chr11:73130800-73150000	Weak transcription	Duodenum Mucosa	Duodenum
45	chr11:73131000-73136600	Weak transcription	Brain Anterior Caudate	brain
46	chr11:73131000-73137000	Weak transcription	Fetal Stomach	stomach
47	chr11:73131000-73138800	Weak transcription	Fetal Thymus	thymus
48	chr11:73131000-73140400	Weak transcription	Fetal Intestine Large	intestine
49	chr11:73131000-73190000	Weak transcription	Primary T helper cells PMA-I stimulated	--
50	chr11:73131200-73136200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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