Variant report

Variant rs2299812
Chromosome Location chr21:45438890-45438891
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45433200-45452600 Weak transcription Aorta Aorta
2 chr21:45433600-45444800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr21:45433600-45444800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr21:45433800-45439000 Weak transcription Fetal Intestine Small intestine
5 chr21:45433800-45444800 Weak transcription H9 Cell Line embryonic stem cell
6 chr21:45433800-45448000 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr21:45434000-45439200 Enhancers Liver Liver
8 chr21:45434000-45441400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr21:45434000-45441400 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr21:45434000-45444000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr21:45434000-45444600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr21:45434000-45444800 Weak transcription Placenta Placenta
13 chr21:45434200-45439000 Enhancers Primary neutrophils fromperipheralblood blood
14 chr21:45434200-45440400 Weak transcription Brain Angular Gyrus brain
15 chr21:45434200-45443400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr21:45434200-45448800 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr21:45434200-45450800 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr21:45434400-45440600 Weak transcription Fetal Heart heart
19 chr21:45434400-45441000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr21:45434400-45446800 Enhancers Primary T helper cells fromperipheralblood blood
21 chr21:45434400-45451000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr21:45434600-45439200 Weak transcription Right Atrium heart
23 chr21:45434600-45444800 Weak transcription Esophagus oesophagus
24 chr21:45434800-45440200 Enhancers Dnd41 blood
25 chr21:45434800-45440400 Weak transcription Stomach Smooth Muscle stomach
26 chr21:45434800-45440600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr21:45434800-45440600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr21:45434800-45440600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr21:45434800-45441400 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr21:45434800-45444800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr21:45434800-45444800 Weak transcription Fetal Intestine Large intestine
32 chr21:45434800-45444800 Weak transcription HSMM muscle
33 chr21:45434800-45445000 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr21:45434800-45447200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr21:45434800-45447400 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr21:45435000-45440000 Enhancers Primary hematopoietic stem cells blood
37 chr21:45435000-45440000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr21:45435000-45440400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr21:45435000-45440600 Weak transcription Brain Inferior Temporal Lobe brain
40 chr21:45435000-45441000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr21:45435000-45444000 Weak transcription NHEK skin
42 chr21:45435000-45444600 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr21:45435000-45444800 Enhancers Primary T helper cells PMA-I stimulated --
44 chr21:45435000-45450200 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr21:45435200-45445200 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr21:45435400-45439000 Weak transcription Duodenum Mucosa Duodenum
47 chr21:45435400-45444200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr21:45435800-45444200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr21:45436000-45442200 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr21:45436400-45444200 Weak transcription Osteobl bone

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