Variant report

Variant rs2300144
Chromosome Location chr12:8087876-8087877
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8077800-8088800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr12:8082000-8088000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:8082800-8088600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
4 chr12:8084000-8088800 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
5 chr12:8085000-8088600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
6 chr12:8085400-8088400 Transcr. at gene 5' and 3' Dnd41 blood
7 chr12:8085400-8089400 Active TSS Brain Inferior Temporal Lobe brain
8 chr12:8085600-8089200 Active TSS Brain Substantia Nigra brain
9 chr12:8085600-8089400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr12:8085800-8088000 Active TSS Brain Anterior Caudate brain
11 chr12:8085800-8088800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr12:8085800-8088800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
13 chr12:8085800-8088800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
14 chr12:8085800-8088800 Active TSS Placenta Amnion Placenta Amnion
15 chr12:8085800-8089000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr12:8085800-8089200 Active TSS Duodenum Mucosa Duodenum
17 chr12:8085800-8089200 Active TSS Fetal Kidney kidney
18 chr12:8085800-8089400 Active TSS Stomach Smooth Muscle stomach
19 chr12:8085800-8089400 Active TSS GM12878-XiMat blood
20 chr12:8086000-8088400 Transcr. at gene 5' and 3' Primary Natural Killer cells fromperipheralblood blood
21 chr12:8086000-8088800 Active TSS ES-WA7 Cell Line embryonic stem cell
22 chr12:8086000-8088800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
23 chr12:8086000-8088800 Flanking Active TSS Primary hematopoietic stem cells blood
24 chr12:8086000-8088800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr12:8086000-8088800 Active TSS Liver Liver
26 chr12:8086000-8088800 Active TSS Fetal Muscle Trunk muscle
27 chr12:8086000-8088800 Active TSS Left Ventricle heart
28 chr12:8086000-8088800 Active TSS Lung lung
29 chr12:8086000-8088800 Active TSS HSMMtube muscle
30 chr12:8086000-8088800 Flanking Active TSS HUVEC blood vessel
31 chr12:8086000-8089000 Active TSS Psoas Muscle Psoas
32 chr12:8086000-8089000 Active TSS Right Ventricle heart
33 chr12:8086000-8089200 Active TSS iPS-15b Cell Line embryonic stem cell
34 chr12:8086000-8089200 Active TSS Brain Cingulate Gyrus brain
35 chr12:8086000-8089400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr12:8086000-8089400 Active TSS Duodenum Smooth Muscle Duodenum
37 chr12:8086000-8089400 Active TSS Pancreatic Islets Pancreatic Islet
38 chr12:8086000-8089400 Active TSS Right Atrium heart
39 chr12:8086200-8088800 Active TSS Breast Myoepithelial Primary Cells Breast
40 chr12:8086200-8088800 Active TSS Colonic Mucosa Colon
41 chr12:8086200-8088800 Active TSS Rectal Smooth Muscle rectum
42 chr12:8086200-8088800 Active TSS Skeletal Muscle Male skeletal muscle
43 chr12:8086200-8089000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
44 chr12:8086200-8089000 Active TSS Ovary ovary
45 chr12:8086200-8089200 Active TSS Brain Hippocampus Middle brain
46 chr12:8086200-8089400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
47 chr12:8086400-8088800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr12:8086400-8088800 Active TSS Fetal Intestine Small intestine
49 chr12:8086400-8088800 Active TSS NH-A brain
50 chr12:8086400-8088800 Active TSS NHLF lung

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