Variant report

Variant	rs73260674
Chromosome Location	chr12:8085898-8085899
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr12:8085764-8086236	HepG2	liver:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
2	CTCF	chr12:8085744-8086266	K562	blood:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
3	EBF1	chr12:8085761-8086258	GM12878	blood:	n/a	n/a
4	ELF1	chr12:8085742-8086142	A549	lung:	n/a	n/a
5	CREB1	chr12:8085795-8086256	HepG2	liver:	n/a	n/a
6	RCOR1	chr12:8085878-8086123	K562	blood:	n/a	n/a
7	CBX3	chr12:8085734-8086265	HCT-116	colon:	n/a	n/a
8	CTCF	chr12:8085860-8086010	SK-N-SH_RA	brain:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
9	CTCF	chr12:8085796-8086173	Medullo	brain:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
10	CTCF	chr12:8085649-8086445	HCT-116	colon:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
11	CEBPB	chr12:8085830-8086183	Hela-S3	cervix:	n/a	n/a
12	RAD21	chr12:8085866-8086083	K562	blood:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
13	CTCF	chr12:8085800-8085950	A549	lung:	n/a	chr12:8085932-8085945 chr12:8085929-8085947
14	RUNX3	chr12:8085821-8086235	GM12878	blood:	n/a	n/a
15	RAD21	chr12:8085651-8086216	A549	lung:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
16	POLR2A	chr12:8085802-8086522	K562	blood:	n/a	n/a
17	TEAD4	chr12:8085758-8086158	K562	blood:	n/a	n/a
18	RAD21	chr12:8085734-8086245	H1-hESC	embryonic stem cell:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
19	CTCF	chr12:8085880-8086030	HUVEC	blood vessel:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
20	RFX5	chr12:8085816-8086229	Hela-S3	cervix:	n/a	n/a
21	RAD21	chr12:8085666-8086237	HCT-116	colon:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
22	CTCF	chr12:8085818-8086222	Gliobla	brain:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
23	CTCF	chr12:8085793-8086160	HepG2	liver:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
24	JUND	chr12:8085753-8086145	H1-hESC	embryonic stem cell:	n/a	chr12:8085816-8085825
25	ZNF384	chr12:8085824-8086085	K562	blood:	n/a	n/a
26	CTCF	chr12:8085860-8086010	SAEC	small airway:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
27	BRCA1	chr12:8085784-8086251	Hela-S3	cervix:	n/a	n/a
28	BCLAF1	chr12:8085747-8086220	GM12878	blood:	n/a	n/a
29	ELF1	chr12:8085869-8086154	K562	blood:	n/a	n/a
30	CTCF	chr12:8085840-8085990	GM12872	blood:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
31	FOXM1	chr12:8085822-8086265	MCF-7	breast:	n/a	n/a
32	POLR2A	chr12:8083872-8088928	K562	blood:	n/a	n/a
33	STAT3	chr12:8085887-8086201	MCF10A-Er-Src	breast:	n/a	n/a
34	CHD1	chr12:8084004-8089423	IMR90	lung:	n/a	n/a
35	EBF1	chr12:8085841-8086172	GM12878	blood:	n/a	n/a
36	TEAD4	chr12:8085680-8086195	HepG2	liver:	n/a	n/a
37	CTCF	chr12:8085880-8086030	HVMF	connective:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
38	RAD21	chr12:8085753-8086266	A549	lung:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
39	POLR2A	chr12:8085063-8086533	Hela-S3	cervix:	n/a	n/a
40	GABPA	chr12:8085875-8086163	Hela-S3	cervix:	n/a	n/a
41	CTCF	chr12:8085860-8086010	AG04450	lung:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
42	CUX1	chr12:8085802-8086266	GM12878	blood:	n/a	n/a
43	RAD21	chr12:8085743-8086257	Hela-S3	cervix:	n/a	chr12:8085966-8085978 chr12:8085930-8085949
44	POLR2A	chr12:8085222-8087663	H1-hESC	embryonic stem cell:	n/a	n/a
45	CTCF	chr12:8085763-8086264	H1-hESC	embryonic stem cell:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
46	STAT1	chr12:8085783-8086209	GM12878	blood:	n/a	n/a
47	EGR1	chr12:8085859-8086163	K562	blood:	n/a	chr12:8086048-8086062 chr12:8086069-8086076
48	SMC3	chr12:8085683-8086225	HepG2	liver:	n/a	chr12:8085931-8085945
49	CTCF	chr12:8085854-8086198	Fibrobl	skin:	n/a	chr12:8085932-8085945 chr12:8085929-8085947 chr12:8085931-8085952
50	ETS1	chr12:8085864-8086160	GM12878	blood:	n/a	chr12:8086023-8086034

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:8085898-8085948	AG10803	skin:	n/a
2	chr12:8085898-8085948	Caco-2	colon:	n/a
3	chr12:8085898-8085948	HIPEpiC	eye:	n/a
4	chr12:8085898-8085948	GM12878	blood:	n/a
5	chr12:8085898-8085948	BJ	skin:	n/a
6	chr12:8085898-8085948	SK-N-SH_RA	brain:	n/a
7	chr12:8085898-8085948	NHDF-neo	bronchial:	n/a
8	chr12:8085898-8085948	GM19239	blood:	n/a
9	chr12:8085898-8085948	AoSMC	blood vessel:	n/a
10	chr12:8085898-8085948	Hepatocyte	liver:	n/a
11	chr12:8085898-8085948	ProgFib	skin:	n/a
12	chr12:8085898-8085948	HUVEC	blood vessel:	n/a
13	chr12:8085898-8085948	HNPCEpiC	eye:	n/a
14	chr12:8085898-8085948	SK-N-SH	brain:	n/a
15	chr12:8085898-8085948	RPTEC	kidney:	n/a
16	chr12:8085898-8085948	MCF-7	breast:	n/a
17	chr12:8085898-8085948	HRE	kidney:	n/a
18	chr12:8085898-8085948	HAEpiC	amniotic membrane:	n/a
19	chr12:8085898-8085948	HMEC	breast:	n/a
20	chr12:8085898-8085948	MCF10A-Er-Src	breast:	n/a
21	chr12:8085898-8085948	NT2-D1	testis:	n/a
22	chr12:8085898-8085948	AG09319	gingival:	n/a
23	chr12:8085898-8085948	HEEpiC	esophagus:	n/a
24	chr12:8085898-8085948	T-47D	breast:	n/a
25	chr12:8085898-8085948	HRCEpiC	kidney:	n/a
26	chr12:8085898-8085948	U87	brain:	n/a
27	chr12:8085898-8085948	HL-60	blood:	n/a
28	chr12:8085898-8085948	SK-N-MC	brain:	n/a
29	chr12:8085898-8085948	CMK	blood:	n/a
30	chr12:8085898-8085948	H1-hESC	embryonic stem cell:	embryo
31	chr12:8085898-8085948	HCT-116	colon:	n/a
32	chr12:8085898-8085948	ECC-1	luminal epithelium:	n/a
33	chr12:8085898-8085948	HCF	heart:	n/a
34	chr12:8085898-8085948	AG04449	skin:	fetal
35	chr12:8085898-8085948	AG04450	lung:	fetal
36	chr12:8085898-8085948	K562	blood:	n/a
37	chr12:8085898-8085948	BE2_C	brain:	n/a
38	chr12:8085898-8085948	HPAEpiC	pulmonary alveolar:	n/a
39	chr12:8085898-8085948	HCPEpiC	choroid plexus:	n/a
40	chr12:8085898-8085948	NHBE	bronchial:	n/a
41	chr12:8085898-8085948	GM12892	blood:	n/a
42	chr12:8085898-8085948	ovcar-3	ovarian:	n/a
43	chr12:8085898-8085948	AG09309	skin:	n/a
44	chr12:8085898-8085948	HCM	heart:	n/a
45	chr12:8085898-8085948	LNCaP	prostate:	n/a
46	chr12:8085898-8085948	HEK293	kidney:	embryo
47	chr12:8085898-8085948	IMR90	lung:	fetal
48	chr12:8085898-8085948	A549	lung:	n/a
49	chr12:8085898-8085948	HRPEpiC	eye:	n/a
50	chr12:8085898-8085948	HepG2	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:8085591..8086340-chr12:8147548..8148474,2	K562	blood:
2	chr12:8083581..8086103-chr12:8144653..8146389,2	K562	blood:
3	chr12:8085816..8086359-chr12:8113371..8113882,2	MCF-7	breast:
4	chr12:8012407..8013335-chr12:8085608..8086866,5	MCF-7	breast:
5	chr12:8078026..8081783-chr12:8085460..8087380,4	K562	blood:
6	chr12:8084166..8086754-chr12:8153249..8156056,2	K562	blood:
7	chr12:8085519..8086564-chr12:8147572..8148265,4	MCF-7	breast:
8	chr12:8083356..8086081-chr12:8183722..8185622,2	K562	blood:
9	chr12:8084020..8086848-chr12:8141207..8142977,3	K562	blood:

Variant related genes	Relation type
SLC2A3	TF binding region
SLC2A3	CpG island
ENSG00000241828	Chromatin interaction
ENSG00000240739	Chromatin interaction
ENSG00000065970	Chromatin interaction

Extended variants
information (count: 426 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs2300143	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2300144	0.86[ASN][1000 genomes]
rs58060502	1.00[EUR][1000 genomes]
rs7311707	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:422 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048545	chr12:7778760-8608231	Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
2	nsv541368	chr12:7778760-8608231	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
3	nsv1053321	chr12:7804807-8118176	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	nsv541369	chr12:7804807-8118176	Enhancers Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
5	nsv1052885	chr12:7805007-8118037	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
6	nsv541370	chr12:7805007-8118037	Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
7	esv2422200	chr12:7832566-8106817	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
8	nsv430449	chr12:7853512-8117069	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
9	nsv430450	chr12:7853512-8146693	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
10	esv2422501	chr12:7855161-8106817	Transcr. at gene 5' and 3' Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
11	esv1800741	chr12:7856819-8124619	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
12	esv1795892	chr12:7856819-8508693	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
13	esv2758292	chr12:7856819-8623987	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
14	esv2759877	chr12:7856819-8623987	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
15	nsv428270	chr12:7856819-8623987	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
16	nsv1040251	chr12:7862584-8118037	Active TSS Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
17	nsv541371	chr12:7862584-8118037	Strong transcription Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
18	nsv430451	chr12:7884351-8117069	Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
19	esv34893	chr12:7891406-8116068	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
20	nsv534188	chr12:7899994-8088660	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
21	esv2757487	chr12:7900184-8142583	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
22	esv1799964	chr12:7918642-8098689	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
23	nsv1054331	chr12:7924713-8183422	Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
24	nsv541373	chr12:7929340-8113674	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
25	nsv541375	chr12:7933210-8113674	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
26	nsv541376	chr12:7933210-8134274	Flanking Active TSS Weak transcription Active TSS Genic enhancers Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
27	nsv1051186	chr12:7941339-8118037	Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
28	nsv541377	chr12:7941339-8118037	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
29	esv1800722	chr12:7942587-8142343	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
30	nsv516107	chr12:7953089-8148099	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
31	nsv430454	chr12:7954033-8117073	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
32	nsv430452	chr12:7954033-8142583	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
33	nsv430455	chr12:7954035-8117069	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
34	esv34438	chr12:7954051-8116068	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
35	esv34531	chr12:7954051-8116068	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
36	esv34692	chr12:7954051-8117073	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
37	esv34839	chr12:7954051-8134669	Active TSS Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
38	nsv1038435	chr12:7957777-8123225	Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
39	nsv1047354	chr12:7959256-8123225	Active TSS Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
40	nsv430456	chr12:7959613-8116063	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
41	nsv1046644	chr12:7959616-8123225	Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
42	esv2751113	chr12:7959616-8140401	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
43	nsv468995	chr12:7961576-8123306	Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
44	nsv468996	chr12:7961576-8123306	Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
45	nsv557276	chr12:7961576-8123306	Bivalent Enhancer Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
46	nsv1049787	chr12:7962749-8123225	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
47	esv34016	chr12:7963212-8116021	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
48	esv2751114	chr12:7963212-8117069	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
49	esv34279	chr12:7963212-8134669	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
50	nsv1043063	chr12:7963844-8123225	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8067200-8087600	Weak transcription	Gastric	stomach
2	chr12:8069800-8086000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr12:8071400-8086000	Weak transcription	Colonic Mucosa	Colon
4	chr12:8071600-8086200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr12:8071600-8086200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr12:8071800-8086000	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr12:8076000-8086400	Weak transcription	Small Intestine	intestine
8	chr12:8077800-8086000	Strong transcription	Fetal Stomach	stomach
9	chr12:8077800-8088800	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr12:8079000-8086000	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
11	chr12:8080600-8086000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr12:8081600-8086200	Weak transcription	Fetal Intestine Small	intestine
13	chr12:8082000-8087200	Weak transcription	Esophagus	oesophagus
14	chr12:8082000-8088000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr12:8082400-8086200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr12:8082400-8087600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr12:8082800-8088600	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
18	chr12:8083000-8086000	Genic enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr12:8083600-8086000	Weak transcription	Rectal Smooth Muscle	rectum
20	chr12:8084000-8088800	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
21	chr12:8084200-8086200	Genic enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr12:8084200-8087600	Weak transcription	Aorta	Aorta
23	chr12:8084400-8086000	Weak transcription	Primary hematopoietic stem cells	blood
24	chr12:8084400-8086000	Weak transcription	Right Ventricle	heart
25	chr12:8084400-8086000	Weak transcription	HSMMtube	muscle
26	chr12:8084400-8086800	Weak transcription	Fetal Intestine Large	intestine
27	chr12:8084600-8086000	Weak transcription	Ovary	ovary
28	chr12:8084800-8087000	Transcr. at gene 5' and 3'	Hela-S3	cervix
29	chr12:8084800-8087600	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
30	chr12:8085000-8086000	Weak transcription	Brain Cingulate Gyrus	brain
31	chr12:8085000-8086000	Weak transcription	Thymus	Thymus
32	chr12:8085000-8086200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr12:8085000-8086600	Transcr. at gene 5' and 3'	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr12:8085000-8087000	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr12:8085000-8088600	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
36	chr12:8085200-8086000	Enhancers	Skeletal Muscle Male	skeletal muscle
37	chr12:8085200-8086400	Transcr. at gene 5' and 3'	HepG2	liver
38	chr12:8085200-8087200	Transcr. at gene 5' and 3'	Monocytes-CD14+_RO01746	blood
39	chr12:8085200-8087800	Transcr. at gene 5' and 3'	Primary neutrophils fromperipheralblood	blood
40	chr12:8085400-8086000	Genic enhancers	H1 Cell Line	embryonic stem cell
41	chr12:8085400-8086000	Genic enhancers	H9 Cell Line	embryonic stem cell
42	chr12:8085400-8086000	Genic enhancers	Primary B cells from peripheral blood	blood
43	chr12:8085400-8086400	Transcr. at gene 5' and 3'	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr12:8085400-8086400	Transcr. at gene 5' and 3'	NHLF	lung
45	chr12:8085400-8086600	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
46	chr12:8085400-8087000	Transcr. at gene 5' and 3'	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr12:8085400-8087600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr12:8085400-8088400	Transcr. at gene 5' and 3'	Dnd41	blood
49	chr12:8085400-8089400	Active TSS	Brain Inferior Temporal Lobe	brain
50	chr12:8085600-8086000	Transcr. at gene 5' and 3'	iPS-15b Cell Line	embryonic stem cell

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