Variant report
| Variant | rs2300230 |
|---|---|
| Chromosome Location | chr12:12315857-12315858 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12262400-12335600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 2 | chr12:12269600-12343200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 3 | chr12:12272200-12344600 | Weak transcription | Primary B cells from cord blood | blood |
| 4 | chr12:12272400-12325200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 5 | chr12:12279800-12342800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr12:12281800-12335600 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr12:12287400-12318200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 8 | chr12:12288200-12342800 | Weak transcription | K562 | blood |
| 9 | chr12:12289400-12318200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 10 | chr12:12297200-12318000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr12:12297600-12321400 | Weak transcription | Gastric | stomach |
| 12 | chr12:12302000-12318000 | Weak transcription | Stomach Mucosa | stomach |
| 13 | chr12:12302200-12325000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 14 | chr12:12302200-12338400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 15 | chr12:12302800-12317200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 16 | chr12:12303600-12318200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 17 | chr12:12303800-12316200 | Weak transcription | GM12878-XiMat | blood |
| 18 | chr12:12303800-12316600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr12:12303800-12335600 | Weak transcription | Right Ventricle | heart |
| 20 | chr12:12304000-12319800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr12:12304000-12353000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 22 | chr12:12305400-12317400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 23 | chr12:12305400-12318000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr12:12306600-12318200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 25 | chr12:12306800-12325200 | Weak transcription | Small Intestine | intestine |
| 26 | chr12:12307800-12317600 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 27 | chr12:12309600-12318000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 28 | chr12:12310000-12321000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 29 | chr12:12311200-12317400 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr12:12312000-12317400 | Weak transcription | Brain Angular Gyrus | brain |
| 31 | chr12:12312000-12317400 | Weak transcription | Brain Anterior Caudate | brain |
| 32 | chr12:12312000-12317400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 33 | chr12:12312000-12325000 | Weak transcription | Aorta | Aorta |
| 34 | chr12:12312000-12325000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr12:12312000-12332600 | Weak transcription | Dnd41 | blood |
| 36 | chr12:12312000-12350600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 37 | chr12:12312200-12316600 | Weak transcription | Fetal Muscle Leg | muscle |
| 38 | chr12:12312200-12316800 | Weak transcription | Left Ventricle | heart |
| 39 | chr12:12312200-12317000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 40 | chr12:12312200-12317000 | Weak transcription | Brain Hippocampus Middle | brain |
| 41 | chr12:12312200-12317400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 42 | chr12:12312200-12325000 | Weak transcription | HMEC | breast |
| 43 | chr12:12312200-12334000 | Weak transcription | Pancreas | Pancrea |
| 44 | chr12:12312200-12334600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr12:12312200-12338000 | Weak transcription | Brain Germinal Matrix | brain |
| 46 | chr12:12312200-12355800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 47 | chr12:12312200-12362000 | Weak transcription | Hela-S3 | cervix |
| 48 | chr12:12312400-12319200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 49 | chr12:12312400-12325200 | Weak transcription | Primary T cells from cord blood | blood |
| 50 | chr12:12312400-12332400 | Weak transcription | Primary hematopoietic stem cells | blood |
