Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1203340	0.88[ASN][1000 genomes]
rs1203341	0.88[ASN][1000 genomes]
rs1203342	0.91[ASN][1000 genomes]
rs1203343	0.88[ASN][1000 genomes]
rs1203344	0.87[ASN][1000 genomes]
rs1203345	0.87[ASN][1000 genomes]
rs1203346	0.87[ASN][1000 genomes]
rs1203347	0.87[ASN][1000 genomes]
rs1203348	0.87[ASN][1000 genomes]
rs1203355	0.87[ASN][1000 genomes]
rs12526873	0.92[ASN][1000 genomes]
rs1933759	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1933764	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1933765	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1933766	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1933767	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1933768	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2876084	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4897429	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6569688	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6940599	0.92[ASN][1000 genomes]
rs766966	0.87[ASN][1000 genomes]
rs766967	0.88[ASN][1000 genomes]
rs9321230	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9375731	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9388802	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533971	chr6:130490694-131172051	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:130846000-130851000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:130847600-130851200	Weak transcription	Fetal Muscle Leg	muscle
3	chr6:130848400-130851000	Weak transcription	HMEC	breast
4	chr6:130848600-130855400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:130848800-130850200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:130848800-130850600	Weak transcription	Primary B cells from peripheral blood	blood
7	chr6:130848800-130856200	Weak transcription	NHEK	skin

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