Variant report

Variant rs234366
Chromosome Location chr19:40475499-40475500
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40457400-40475600 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr19:40460800-40476000 Weak transcription Psoas Muscle Psoas
3 chr19:40466200-40476200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr19:40468600-40475600 Weak transcription Brain Anterior Caudate brain
5 chr19:40472600-40475600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr19:40472800-40476000 Weak transcription Brain Angular Gyrus brain
7 chr19:40473000-40476000 Enhancers Primary T cells fromperipheralblood blood
8 chr19:40473000-40476000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr19:40474000-40476200 Weak transcription Fetal Kidney kidney
10 chr19:40474000-40476200 Enhancers HepG2 liver
11 chr19:40474200-40475600 Enhancers Primary T helper cells fromperipheralblood blood
12 chr19:40474200-40476200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr19:40474400-40476000 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr19:40474600-40476000 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr19:40474800-40475600 Enhancers Primary T regulatory cells fromperipheralblood blood
16 chr19:40474800-40475600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr19:40474800-40476200 Enhancers Primary B cells from cord blood blood
18 chr19:40474800-40476200 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr19:40474800-40476200 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr19:40474800-40476200 Enhancers Esophagus oesophagus
21 chr19:40474800-40476200 Enhancers Rectal Mucosa Donor 31 rectum
22 chr19:40475000-40475600 Enhancers K562 blood
23 chr19:40475000-40476000 Enhancers HMEC breast
24 chr19:40475000-40476200 Enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr19:40475000-40476200 Weak transcription Colonic Mucosa Colon
26 chr19:40475000-40476400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
27 chr19:40475200-40475600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr19:40475200-40475800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr19:40475200-40475800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr19:40475200-40475800 Enhancers A549 lung
31 chr19:40475200-40475800 Flanking Active TSS GM12878-XiMat blood
32 chr19:40475200-40475800 Flanking Active TSS NHEK skin
33 chr19:40475200-40476000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr19:40475200-40476000 Enhancers Brain Hippocampus Middle brain
35 chr19:40475200-40476200 Enhancers Primary B cells from peripheral blood blood
36 chr19:40475200-40476200 Enhancers Adipose Nuclei Adipose
37 chr19:40475200-40476200 Enhancers Fetal Thymus thymus
38 chr19:40475200-40476200 Enhancers Stomach Mucosa stomach
39 chr19:40475200-40476600 Flanking Active TSS Dnd41 blood
40 chr19:40475400-40475600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
41 chr19:40475400-40475600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr19:40475400-40475600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr19:40475400-40475600 Enhancers Gastric stomach
44 chr19:40475400-40475600 Active TSS Rectal Smooth Muscle rectum
45 chr19:40475400-40475600 Enhancers Spleen Spleen
46 chr19:40475400-40475800 Flanking Active TSS Primary T cells from cord blood blood
47 chr19:40475400-40475800 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr19:40475400-40475800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr19:40475400-40475800 Enhancers Duodenum Mucosa Duodenum
50 chr19:40475400-40475800 Flanking Active TSS Rectal Mucosa Donor 29 rectum

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