Variant report
| Variant | rs234373 |
|---|---|
| Chromosome Location | chr19:40478891-40478892 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:40477800-40479200 | Weak transcription | Ovary | ovary |
| 2 | chr19:40477800-40501800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr19:40478000-40479200 | Weak transcription | Aorta | Aorta |
| 4 | chr19:40478000-40479400 | Genic enhancers | Colon Smooth Muscle | Colon |
| 5 | chr19:40478000-40479600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 6 | chr19:40478000-40485600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 7 | chr19:40478200-40479200 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr19:40478200-40479200 | Genic enhancers | Primary T helper naive cells from peripheral blood | blood |
| 9 | chr19:40478200-40479400 | Weak transcription | Right Ventricle | heart |
| 10 | chr19:40478200-40479600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 11 | chr19:40478200-40479600 | Weak transcription | Small Intestine | intestine |
| 12 | chr19:40478200-40479800 | Genic enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 13 | chr19:40478200-40479800 | Genic enhancers | Primary T killer memory cells from peripheral blood | blood |
| 14 | chr19:40478200-40480200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 15 | chr19:40478200-40481400 | Strong transcription | ES-I3 Cell Line | embryonic stem cell |
| 16 | chr19:40478200-40481600 | Strong transcription | Rectal Smooth Muscle | rectum |
| 17 | chr19:40478200-40481800 | Strong transcription | Primary T cells from cord blood | blood |
| 18 | chr19:40478200-40482000 | Strong transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr19:40478200-40482000 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 20 | chr19:40478200-40482200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 21 | chr19:40478200-40482200 | Strong transcription | Fetal Lung | lung |
| 22 | chr19:40478200-40488200 | Strong transcription | Thymus | Thymus |
| 23 | chr19:40478200-40488400 | Strong transcription | Fetal Stomach | stomach |
| 24 | chr19:40478200-40489200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 25 | chr19:40478200-40489200 | Strong transcription | Primary B cells from cord blood | blood |
| 26 | chr19:40478200-40489400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 27 | chr19:40478200-40489400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 28 | chr19:40478200-40489600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 29 | chr19:40478400-40479000 | Weak transcription | HSMMtube | muscle |
| 30 | chr19:40478400-40479200 | Genic enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr19:40478400-40479200 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 32 | chr19:40478400-40479200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 33 | chr19:40478400-40479600 | Weak transcription | Fetal Brain Male | brain |
| 34 | chr19:40478400-40479600 | Weak transcription | HSMM | muscle |
| 35 | chr19:40478400-40479800 | Genic enhancers | Primary T helper cells PMA-I stimulated | -- |
| 36 | chr19:40478400-40479800 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 37 | chr19:40478400-40479800 | Strong transcription | Lung | lung |
| 38 | chr19:40478400-40480000 | Strong transcription | Fetal Kidney | kidney |
| 39 | chr19:40478400-40480200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr19:40478400-40480400 | Weak transcription | Stomach Mucosa | stomach |
| 41 | chr19:40478400-40480800 | Strong transcription | NHDF-Ad | bronchial |
| 42 | chr19:40478400-40481000 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr19:40478400-40481000 | Strong transcription | Esophagus | oesophagus |
| 44 | chr19:40478400-40481400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 45 | chr19:40478400-40481400 | Strong transcription | A549 | lung |
| 46 | chr19:40478400-40481600 | Strong transcription | Colonic Mucosa | Colon |
| 47 | chr19:40478400-40481800 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 48 | chr19:40478400-40481800 | Strong transcription | iPS-15b Cell Line | embryonic stem cell |
| 49 | chr19:40478400-40481800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 50 | chr19:40478400-40481800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
