Variant report

Variant rs2344602
Chromosome Location chr3:195462777-195462778
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195439000-195465200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr3:195442200-195475000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:195442400-195468200 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr3:195442600-195474200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr3:195442800-195475000 Weak transcription Brain Substantia Nigra brain
6 chr3:195443000-195468000 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr3:195448200-195483800 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:195456400-195463600 Weak transcription Fetal Heart heart
9 chr3:195456400-195464200 Strong transcription Rectal Smooth Muscle rectum
10 chr3:195456400-195465600 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr3:195456600-195465000 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr3:195456800-195464000 Weak transcription Fetal Brain Male brain
13 chr3:195456800-195465600 Strong transcription Liver Liver
14 chr3:195457200-195464600 Strong transcription Fetal Intestine Small intestine
15 chr3:195460200-195463800 Weak transcription Spleen Spleen
16 chr3:195460400-195463200 Weak transcription Fetal Brain Female brain
17 chr3:195460400-195465800 Strong transcription Skeletal Muscle Male skeletal muscle
18 chr3:195460400-195466200 Weak transcription Right Ventricle heart
19 chr3:195460400-195467200 Weak transcription Brain Germinal Matrix brain
20 chr3:195460600-195463800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:195460600-195464400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr3:195460600-195465200 Weak transcription Lung lung
23 chr3:195460600-195465600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr3:195460600-195466600 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr3:195460600-195466600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr3:195460600-195471000 Weak transcription Colon Smooth Muscle Colon
27 chr3:195460600-195473200 Weak transcription Colonic Mucosa Colon
28 chr3:195461400-195462800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:195461600-195463000 Strong transcription Brain Anterior Caudate brain
30 chr3:195461600-195463000 Strong transcription Brain Hippocampus Middle brain
31 chr3:195461600-195463000 Strong transcription Duodenum Mucosa Duodenum
32 chr3:195461600-195463400 Strong transcription Primary T cells from cord blood blood
33 chr3:195461600-195463400 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr3:195462000-195462800 Strong transcription Adipose Nuclei Adipose
35 chr3:195462000-195462800 Strong transcription Brain Angular Gyrus brain
36 chr3:195462000-195462800 Strong transcription Brain Cingulate Gyrus brain
37 chr3:195462000-195462800 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr3:195462000-195463000 Strong transcription Gastric stomach
39 chr3:195462000-195463000 Strong transcription Ovary ovary
40 chr3:195462200-195475400 Weak transcription Stomach Smooth Muscle stomach
41 chr3:195462400-195466400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr3:195462400-195468600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr3:195462600-195463800 Weak transcription Pancreas Pancrea
44 chr3:195462600-195464000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr3:195462600-195465200 Weak transcription Esophagus oesophagus
46 chr3:195462600-195466400 Weak transcription Aorta Aorta
47 chr3:195462600-195466800 Weak transcription Left Ventricle heart
48 chr3:195462600-195471800 Weak transcription Fetal Intestine Large intestine
49 chr3:195462600-195475000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr3:195462600-195475000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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