Variant report

Variant rs2641727
Chromosome Location chr3:195465404-195465405
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195442200-195475000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:195442400-195468200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr3:195442600-195474200 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr3:195442800-195475000 Weak transcription Brain Substantia Nigra brain
5 chr3:195443000-195468000 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr3:195448200-195483800 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:195456400-195465600 Strong transcription Rectal Mucosa Donor 29 rectum
8 chr3:195456800-195465600 Strong transcription Liver Liver
9 chr3:195460400-195465800 Strong transcription Skeletal Muscle Male skeletal muscle
10 chr3:195460400-195466200 Weak transcription Right Ventricle heart
11 chr3:195460400-195467200 Weak transcription Brain Germinal Matrix brain
12 chr3:195460600-195465600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr3:195460600-195466600 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr3:195460600-195466600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr3:195460600-195471000 Weak transcription Colon Smooth Muscle Colon
16 chr3:195460600-195473200 Weak transcription Colonic Mucosa Colon
17 chr3:195462200-195475400 Weak transcription Stomach Smooth Muscle stomach
18 chr3:195462400-195466400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr3:195462400-195468600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr3:195462600-195466400 Weak transcription Aorta Aorta
21 chr3:195462600-195466800 Weak transcription Left Ventricle heart
22 chr3:195462600-195471800 Weak transcription Fetal Intestine Large intestine
23 chr3:195462600-195475000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr3:195462600-195475000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr3:195462800-195471400 Weak transcription Brain Angular Gyrus brain
26 chr3:195462800-195473400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr3:195462800-195475000 Weak transcription Adipose Nuclei Adipose
28 chr3:195462800-195475000 Weak transcription Brain Cingulate Gyrus brain
29 chr3:195463000-195474800 Weak transcription Duodenum Mucosa Duodenum
30 chr3:195463000-195475000 Weak transcription Gastric stomach
31 chr3:195463000-195475000 Weak transcription Ovary ovary
32 chr3:195463000-195475600 Weak transcription Brain Anterior Caudate brain
33 chr3:195463400-195475000 Weak transcription Primary T cells from cord blood blood
34 chr3:195463400-195475000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr3:195464000-195466600 Weak transcription Spleen Spleen
36 chr3:195464000-195474200 Weak transcription Pancreas Pancrea
37 chr3:195464600-195484000 Weak transcription Right Atrium heart
38 chr3:195465000-195465800 Strong transcription Rectal Smooth Muscle rectum
39 chr3:195465000-195475400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr3:195465200-195465600 Enhancers Primary monocytes fromperipheralblood blood
41 chr3:195465200-195466000 Strong transcription Brain Hippocampus Middle brain
42 chr3:195465400-195465800 Strong transcription Fetal Intestine Small intestine
43 chr3:195465400-195466000 ZNF genes & repeats Esophagus oesophagus

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