The 2.0 version of rSNPBase

Variant report

Variant rs2358180
Chromosome Location chr4:148846135-148846136
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148786000-148861400 Weak transcription Pancreas Pancrea
2 chr4:148796800-148863200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr4:148796800-148866000 Weak transcription Thymus Thymus
4 chr4:148797400-148879600 Weak transcription Gastric stomach
5 chr4:148804600-148854400 Weak transcription Psoas Muscle Psoas
6 chr4:148820600-148861200 Weak transcription Esophagus oesophagus
7 chr4:148820800-148848800 Weak transcription Rectal Smooth Muscle rectum
8 chr4:148824400-148854600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr4:148824600-148854400 Weak transcription Right Ventricle heart
10 chr4:148825200-148847400 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr4:148825200-148848400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr4:148825400-148846200 Weak transcription Fetal Kidney kidney
13 chr4:148825400-148861200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr4:148825400-148865800 Weak transcription Fetal Lung lung
15 chr4:148826600-148888200 Weak transcription Fetal Thymus thymus
16 chr4:148827400-148861200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr4:148829400-148864200 Weak transcription Primary T cells from cord blood blood
18 chr4:148831600-148849000 Weak transcription NH-A brain
19 chr4:148832200-148848800 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr4:148832200-148854400 Weak transcription NHEK skin
21 chr4:148833600-148848400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr4:148833600-148877400 Weak transcription Small Intestine intestine
23 chr4:148834800-148849000 Weak transcription NHLF lung
24 chr4:148834800-148861400 Weak transcription Fetal Intestine Large intestine
25 chr4:148835000-148867200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr4:148835000-148869000 Weak transcription Placenta Amnion Placenta Amnion
27 chr4:148835600-148848800 Weak transcription Fetal Stomach stomach
28 chr4:148835600-148854400 Weak transcription Fetal Intestine Small intestine
29 chr4:148836400-148848400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr4:148836400-148861000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr4:148836600-148867000 Weak transcription HMEC breast
32 chr4:148837600-148850600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr4:148837800-148854400 Weak transcription Left Ventricle heart
34 chr4:148838400-148848400 Weak transcription HUVEC blood vessel
35 chr4:148838400-148848800 Weak transcription NHDF-Ad bronchial
36 chr4:148838400-148858400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr4:148838600-148848200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr4:148838600-148848800 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr4:148838800-148849400 Weak transcription Muscle Satellite Cultured Cells --
40 chr4:148838800-148854400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr4:148840200-148853000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:148842000-148847400 Strong transcription Adipose Nuclei Adipose
43 chr4:148843000-148848800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr4:148843200-148846800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:148843200-148846800 Weak transcription Fetal Muscle Trunk muscle
46 chr4:148843400-148847000 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr4:148843400-148847000 Weak transcription Stomach Smooth Muscle stomach
48 chr4:148843400-148848000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr4:148843400-148848400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr4:148843400-148848400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015