Variant report

Variant	rs2360078
Chromosome Location	chr11:8067971-8067972
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs58474311	0.95[AFR][1000 genomes]
rs60339726	0.95[AFR][1000 genomes]
rs61449161	0.85[AFR][1000 genomes]
rs73396716	0.85[AFR][1000 genomes]
rs73396730	0.95[AFR][1000 genomes]
rs73396739	0.95[AFR][1000 genomes]
rs73396740	0.89[AFR][1000 genomes]
rs73396744	0.89[AFR][1000 genomes]
rs73396747	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052808	chr11:8011647-8129191	Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8061200-8076200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr11:8067800-8070600	Weak transcription	Left Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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