Variant report

Variant rs2364618
Chromosome Location chr19:23846354-23846355
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23832600-23865800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:23833400-23849800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:23833800-23849600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:23835200-23846400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr19:23835200-23846600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr19:23835200-23847400 ZNF genes & repeats Fetal Lung lung
7 chr19:23835200-23849800 ZNF genes & repeats Primary T cells from cord blood blood
8 chr19:23835200-23850400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
9 chr19:23835200-23856600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
10 chr19:23835200-23857200 ZNF genes & repeats Fetal Brain Female brain
11 chr19:23835400-23846600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
12 chr19:23835400-23849800 ZNF genes & repeats Primary B cells from peripheral blood blood
13 chr19:23835400-23849800 ZNF genes & repeats Liver Liver
14 chr19:23835400-23849800 ZNF genes & repeats Dnd41 blood
15 chr19:23835400-23849800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
16 chr19:23835400-23850000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr19:23835800-23849800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
18 chr19:23836000-23846800 ZNF genes & repeats Duodenum Mucosa Duodenum
19 chr19:23836000-23847000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr19:23836200-23847400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
21 chr19:23836200-23847600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
22 chr19:23836200-23849800 ZNF genes & repeats Primary hematopoietic stem cells blood
23 chr19:23836200-23850000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
24 chr19:23836400-23847200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
25 chr19:23836400-23847200 ZNF genes & repeats GM12878-XiMat blood
26 chr19:23836400-23848000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
27 chr19:23837000-23847600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr19:23837200-23848200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr19:23837600-23846600 ZNF genes & repeats Thymus Thymus
30 chr19:23839200-23855200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr19:23839800-23847800 Strong transcription Stomach Smooth Muscle stomach
32 chr19:23840000-23846400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr19:23841400-23869200 Weak transcription Gastric stomach
34 chr19:23841800-23847200 Strong transcription H1 Cell Line embryonic stem cell
35 chr19:23842000-23846800 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
36 chr19:23842000-23847800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
37 chr19:23842200-23846800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
38 chr19:23842200-23847400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
39 chr19:23842200-23849800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
40 chr19:23842400-23846400 Strong transcription HUES48 Cell Line embryonic stem cell
41 chr19:23842400-23846400 Strong transcription Pancreas Pancrea
42 chr19:23842400-23846600 ZNF genes & repeats Fetal Intestine Small intestine
43 chr19:23842400-23847400 ZNF genes & repeats NHEK skin
44 chr19:23842400-23850000 ZNF genes & repeats Fetal Stomach stomach
45 chr19:23843000-23846800 Strong transcription Left Ventricle heart
46 chr19:23843600-23846400 Weak transcription HMEC breast
47 chr19:23843800-23846400 ZNF genes & repeats Lung lung
48 chr19:23844000-23846600 ZNF genes & repeats Fetal Thymus thymus
49 chr19:23844000-23846600 Strong transcription Placenta Amnion Placenta Amnion
50 chr19:23844000-23847600 ZNF genes & repeats Primary T cells fromperipheralblood blood

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