Variant report

Variant	rs2373113
Chromosome Location	chr2:37373090-37373091
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:37373069-37373858	GM12892	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:37372644..37374273-chr2:37382533..37385006,2	K562	blood:

Variant related genes	Relation type
ENSG00000224891	TF binding region
ENSG00000055332	Chromatin interaction

rs_ID	r²[population]
rs2307483	1.00[EUR][1000 genomes]
rs2373114	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4648202	1.00[EUR][1000 genomes]
rs4648205	1.00[EUR][1000 genomes]
rs6718534	0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72860786	1.00[EUR][1000 genomes]

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37312200-37383200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:37319200-37377200	Strong transcription	Primary monocytes fromperipheralblood	blood
3	chr2:37332600-37375200	Strong transcription	Liver	Liver
4	chr2:37333200-37379600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr2:37336400-37383200	Weak transcription	Psoas Muscle	Psoas
6	chr2:37339800-37376800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr2:37342400-37376400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr2:37342400-37376400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr2:37342400-37376600	Strong transcription	Sigmoid Colon	Sigmoid Colon
10	chr2:37346400-37376200	Strong transcription	Fetal Intestine Large	intestine
11	chr2:37346600-37373200	Weak transcription	Stomach Mucosa	stomach
12	chr2:37347600-37376400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr2:37347800-37376400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr2:37347800-37376400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
15	chr2:37348400-37376000	Strong transcription	Adipose Nuclei	Adipose
16	chr2:37348400-37377000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr2:37348600-37376200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr2:37348600-37376600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr2:37348600-37377200	Strong transcription	Monocytes-CD14+_RO01746	blood
20	chr2:37348600-37377400	Strong transcription	Dnd41	blood
21	chr2:37348800-37376200	Strong transcription	Primary T cells fromperipheralblood	blood
22	chr2:37348800-37376400	Strong transcription	Fetal Muscle Trunk	muscle
23	chr2:37348800-37376600	Strong transcription	Fetal Thymus	thymus
24	chr2:37348800-37376800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr2:37349000-37375400	Strong transcription	Duodenum Mucosa	Duodenum
26	chr2:37349000-37376200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr2:37349000-37376200	Strong transcription	Fetal Brain Female	brain
28	chr2:37351800-37376000	Strong transcription	Primary T helper cells fromperipheralblood	blood
29	chr2:37353000-37377200	Strong transcription	Fetal Muscle Leg	muscle
30	chr2:37355000-37383200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr2:37355200-37374800	Strong transcription	GM12878-XiMat	blood
32	chr2:37355200-37376000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
33	chr2:37355200-37376800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr2:37356800-37377000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr2:37357400-37376200	Strong transcription	Skeletal Muscle Female	skeletal muscle
36	chr2:37358200-37375000	Strong transcription	HUES48 Cell Line	embryonic stem cell
37	chr2:37358200-37376600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr2:37359000-37375800	Strong transcription	Ovary	ovary
39	chr2:37359000-37376200	Strong transcription	HUES64 Cell Line	embryonic stem cell
40	chr2:37359800-37375000	Strong transcription	Stomach Smooth Muscle	stomach
41	chr2:37360000-37376200	Strong transcription	HepG2	liver
42	chr2:37361000-37375400	Strong transcription	Placenta	Placenta
43	chr2:37361600-37373200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr2:37361800-37383200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr2:37362200-37376800	Weak transcription	Pancreatic Islets	Pancreatic Islet
46	chr2:37362800-37378400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
47	chr2:37363600-37376200	Weak transcription	Pancreas	Pancrea
48	chr2:37363600-37382600	Weak transcription	Esophagus	oesophagus
49	chr2:37363800-37373400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr2:37364200-37373200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

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