Variant report
| Variant | rs2378500 |
|---|---|
| Chromosome Location | chr1:222137194-222137195 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:222133400-222137400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 2 | chr1:222133600-222137400 | Enhancers | Dnd41 | blood |
| 3 | chr1:222134600-222137400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 4 | chr1:222134800-222137400 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 5 | chr1:222135000-222138000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 6 | chr1:222135600-222137400 | Enhancers | Hela-S3 | cervix |
| 7 | chr1:222135600-222137800 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 8 | chr1:222135600-222138000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 9 | chr1:222135600-222138000 | Weak transcription | Stomach Mucosa | stomach |
| 10 | chr1:222135800-222137200 | Weak transcription | A549 | lung |
| 11 | chr1:222135800-222137600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 12 | chr1:222135800-222138000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 13 | chr1:222135800-222138600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 14 | chr1:222136000-222137200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 15 | chr1:222136000-222138000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 16 | chr1:222136000-222138400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 17 | chr1:222136000-222139000 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr1:222136000-222142400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr1:222136200-222137200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 20 | chr1:222136200-222137200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr1:222136200-222138400 | Weak transcription | Osteobl | bone |
| 22 | chr1:222136400-222138200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 23 | chr1:222136400-222138400 | Weak transcription | HepG2 | liver |
| 24 | chr1:222136400-222142400 | Weak transcription | HSMM | muscle |
| 25 | chr1:222136600-222140600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 26 | chr1:222136600-222141600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
