Variant report

Variant	rs2385172
Chromosome Location	chr7:104106026-104106027
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10248725	0.84[JPT][hapmap]
rs10248853	0.84[JPT][hapmap]
rs10268222	0.90[JPT][hapmap]
rs12112342	0.90[JPT][hapmap]
rs13224554	0.85[JPT][hapmap]
rs13238946	0.90[JPT][hapmap]
rs17137711	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1806389	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1858780	0.90[JPT][hapmap]
rs6465986	0.89[JPT][hapmap]
rs6952537	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6977154	0.85[JPT][hapmap]
rs7796342	0.90[JPT][hapmap]
rs7806966	0.90[JPT][hapmap]
rs7811730	0.90[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888925	chr7:104047599-104170560	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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