Variant report

Variant	rs2386660
Chromosome Location	chr10:5672059-5672060
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:173)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:173 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF384	chr10:5671402-5672160	K562	blood:	n/a	n/a
2	MAX	chr10:5671954-5672127	K562	blood:	n/a	n/a
3	RAD21	chr10:5671810-5672204	ECC-1	luminal epithelium:	n/a	n/a
4	CTCF	chr10:5671920-5672070	HRPEpiC	eye:	n/a	n/a
5	CTCF	chr10:5671760-5672153	A549	lung:	n/a	n/a
6	RAD21	chr10:5671663-5672515	SK-N-SH	brain:	n/a	n/a
7	CTCF	chr10:5671756-5672228	IMR90	lung:	n/a	n/a
8	SMC3	chr10:5671809-5672154	K562	blood:	n/a	n/a
9	RUNX3	chr10:5671261-5672151	GM12878	blood:	n/a	n/a
10	CTCF	chr10:5671883-5672095	T-47D	breast:	n/a	n/a
11	CTCF	chr10:5671920-5672070	HCM	heart:	n/a	n/a
12	CTCF	chr10:5671920-5672070	HPAF	blood vessel:	n/a	n/a
13	CTCF	chr10:5671920-5672070	HBMEC	blood vessel:	n/a	n/a
14	RAD21	chr10:5671749-5672276	A549	lung:	n/a	n/a
15	CTCF	chr10:5671876-5672110	LNCaP	prostate:	n/a	n/a
16	RAD21	chr10:5671629-5672328	HCT-116	colon:	n/a	n/a
17	ZNF384	chr10:5671372-5672154	GM12878	blood:	n/a	n/a
18	MYC	chr10:5671864-5672174	MCF10A-Er-Src	breast:	n/a	n/a
19	CTCF	chr10:5671822-5672159	Spleen_OC	spleen:	n/a	n/a
20	RAD21	chr10:5671764-5672104	H1-hESC	embryonic stem cell:	n/a	n/a
21	CTCF	chr10:5671803-5672208	H1-hESC	embryonic stem cell:	n/a	n/a
22	CTCF	chr10:5671856-5672124	A549	lung:	n/a	n/a
23	CTCF	chr10:5671878-5672077	A549	lung:	n/a	n/a
24	RCOR1	chr10:5671842-5672182	K562	blood:	n/a	n/a
25	CTCF	chr10:5671874-5672095	GM20000	blood:	n/a	n/a
26	CTCF	chr10:5671920-5672070	GM12872	blood:	n/a	n/a
27	RUNX3	chr10:5671289-5672188	GM12878	blood:	n/a	n/a
28	CTCF	chr10:5671920-5672070	HMF	breast:	n/a	n/a
29	CTCF	chr10:5671854-5672126	MCF-7	breast:	n/a	n/a
30	CTCF	chr10:5671920-5672070	AG09319	gingival:	n/a	n/a
31	CTCF	chr10:5671758-5672286	HCT-116	colon:	n/a	n/a
32	CTCF	chr10:5671864-5672119	MCF-7	breast:	n/a	n/a
33	CTCF	chr10:5671920-5672070	GM12871	blood:	n/a	n/a
34	YY1	chr10:5671899-5672078	GM12892	blood:	n/a	n/a
35	RAD21	chr10:5671704-5672262	MCF-7	breast:	n/a	n/a
36	FOXA1	chr10:5671765-5672062	HepG2	liver:	n/a	n/a
37	CTCF	chr10:5671842-5672139	GM19239	blood:	n/a	n/a
38	CTCF	chr10:5671862-5672118	ProgFib	skin:	n/a	n/a
39	ZNF143	chr10:5671816-5672215	H1-hESC	embryonic stem cell:	n/a	n/a
40	YY1	chr10:5671856-5672061	K562	blood:	n/a	n/a
41	MYC	chr10:5671878-5672128	MCF10A-Er-Src	breast:	n/a	n/a
42	CTCF	chr10:5671920-5672070	GM12878	blood:	n/a	n/a
43	CTCF	chr10:5671920-5672070	HPF	lung:	n/a	n/a
44	CREB1	chr10:5671850-5672097	A549	lung:	n/a	n/a
45	ZNF143	chr10:5671789-5672178	K562	blood:	n/a	n/a
46	CTCF	chr10:5671920-5672070	GM12801	blood:	n/a	n/a
47	RAD21	chr10:5671817-5672183	K562	blood:	n/a	n/a
48	RFX5	chr10:5671828-5672130	Hela-S3	cervix:	n/a	chr10:5671880-5671894
49	CTCF	chr10:5671920-5672070	GM12873	blood:	n/a	n/a
50	CTCF	chr10:5671920-5672070	Hela-S3	cervix:	n/a	n/a

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:5666540..5670442-chr10:5670663..5674489,4	MCF-7	breast:
2	chr10:5533027..5543195-chr10:5659124..5672516,23	MCF-7	breast:
3	chr10:5488416..5489958-chr10:5672026..5673890,2	K562	blood:
4	chr10:5668872..5673126-chr10:5707160..5709989,4	MCF-7	breast:
5	chr10:5671812..5672514-chr10:5817672..5818300,2	MCF-7	breast:
6	chr10:5672014..5674575-chr10:5854060..5856479,2	MCF-7	breast:
7	chr10:5490412..5494484-chr10:5671692..5675965,4	K562	blood:
8	chr10:5486822..5491535-chr10:5671952..5676641,6	MCF-7	breast:
9	chr10:5488364..5489916-chr10:5672026..5673861,2	K562	blood:
10	chr10:5670551..5672473-chr10:5683404..5685273,2	MCF-7	breast:

No data

Variant related genes	Relation type
RN7SL445P	TF binding region
ENSG00000270427	Chromatin interaction
ENSG00000178372	Chromatin interaction
ENSG00000173848	Chromatin interaction
ENSG00000272764	Chromatin interaction
ENSG00000057608	Chromatin interaction
ENSG00000228685	Chromatin interaction
ENSG00000196372	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11255593	0.80[ASN][1000 genomes]
rs11256322	1.00[CHB][hapmap];0.86[JPT][hapmap];0.86[YRI][hapmap];0.97[ASN][1000 genomes]
rs11256474	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.80[TSI][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1317212	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.84[TSI][hapmap];1.00[YRI][hapmap]
rs1573	0.93[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];0.93[CHD][hapmap];0.89[MEX][hapmap];0.82[YRI][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2386648	1.00[CEU][hapmap];0.81[CHB][hapmap];0.81[YRI][hapmap];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2386649	0.93[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];0.93[CHD][hapmap];0.89[MEX][hapmap];0.81[YRI][hapmap];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2386655	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2386659	1.00[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4414128	0.90[MEX][hapmap];0.82[TSI][hapmap];0.83[EUR][1000 genomes]
rs45451594	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4601655	0.93[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];0.93[CHD][hapmap];0.89[MEX][hapmap];0.82[YRI][hapmap];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7895921	0.89[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs7922326	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534685	chr10:4914018-5853324	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
2	nsv523491	chr10:5542109-5720067	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
3	esv2757364	chr10:5557024-5720512	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
4	esv2759729	chr10:5557024-5804780	Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
5	esv2758209	chr10:5637111-5804780	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
6	nsv1054888	chr10:5645033-5694612	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
7	nsv519582	chr10:5646103-5720067	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
8	nsv894807	chr10:5647942-5691135	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv8599	chr10:5649129-5719928	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
10	nsv1050965	chr10:5649760-5717125	Enhancers Genic enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
11	nsv1044330	chr10:5652006-5717125	Weak transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
12	nsv975791	chr10:5652225-5711077	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
13	nsv466720	chr10:5652277-5715401	Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
14	nsv549892	chr10:5652277-5715401	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
15	nsv1037709	chr10:5652739-5717125	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
16	nsv470917	chr10:5654167-5715401	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
17	nsv818742	chr10:5654167-5715401	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
18	nsv1036492	chr10:5656962-5711147	Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
19	nsv540473	chr10:5656962-5711147	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
20	nsv1036253	chr10:5657162-5711008	Strong transcription Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
21	nsv540474	chr10:5657162-5711008	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
22	nsv1040422	chr10:5665458-5714630	Active TSS Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
23	nsv1043251	chr10:5665458-5716555	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
24	nsv1052519	chr10:5665458-5717125	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
25	nsv1038690	chr10:5665458-5720424	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
26	nsv1039650	chr10:5665458-5720512	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
27	nsv1041684	chr10:5665458-5722299	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
28	esv2760149	chr10:5665458-5724382	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
29	nsv1054909	chr10:5665458-5724382	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
30	nsv1049620	chr10:5665458-5725208	Bivalent/Poised TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
31	nsv442170	chr10:5665462-5717127	Flanking Active TSS Enhancers Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
32	esv2753700	chr10:5665774-5716555	Enhancers Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
33	esv34623	chr10:5665774-5716858	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
34	esv35082	chr10:5665774-5716858	Enhancers Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
35	esv2754101	chr10:5665774-5716858	Bivalent Enhancer Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
36	esv2755272	chr10:5665774-5716858	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
37	nsv1038750	chr10:5668208-5711008	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
38	nsv540475	chr10:5668208-5711008	Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:5658000-5673600	Weak transcription	Left Ventricle	heart
2	chr10:5665200-5681800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr10:5665400-5672600	Weak transcription	Lung	lung
4	chr10:5665400-5673800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr10:5665400-5680400	Weak transcription	Brain Hippocampus Middle	brain
6	chr10:5665400-5680600	Weak transcription	Fetal Brain Female	brain
7	chr10:5665600-5673400	Weak transcription	HMEC	breast
8	chr10:5665600-5680400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr10:5665600-5680400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr10:5665600-5680400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr10:5665600-5681800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr10:5665600-5698600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr10:5667200-5674200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr10:5668800-5680400	Weak transcription	Gastric	stomach
15	chr10:5669000-5676400	Enhancers	Pancreas	Pancrea
16	chr10:5669400-5674200	Weak transcription	Spleen	Spleen
17	chr10:5669600-5672200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr10:5670200-5672400	Enhancers	Fetal Stomach	stomach
19	chr10:5670200-5681400	Enhancers	Fetal Thymus	thymus
20	chr10:5670400-5672800	Weak transcription	Fetal Intestine Large	intestine
21	chr10:5670400-5673000	Enhancers	Small Intestine	intestine
22	chr10:5670600-5672400	Enhancers	Primary T helper naive cells from peripheral blood	blood
23	chr10:5670600-5672400	Enhancers	Primary T helper cells PMA-I stimulated	--
24	chr10:5670600-5672600	Enhancers	Primary T cells from cord blood	blood
25	chr10:5670600-5672600	Enhancers	Thymus	Thymus
26	chr10:5670600-5672800	Enhancers	Stomach Mucosa	stomach
27	chr10:5670800-5672200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr10:5670800-5672400	Enhancers	Primary T killer memory cells from peripheral blood	blood
29	chr10:5670800-5672800	Weak transcription	Esophagus	oesophagus
30	chr10:5670800-5674000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr10:5671000-5672200	Enhancers	Duodenum Mucosa	Duodenum
32	chr10:5671000-5672200	Enhancers	Rectal Mucosa Donor 31	rectum
33	chr10:5671000-5672600	Enhancers	Duodenum Smooth Muscle	Duodenum
34	chr10:5671000-5672600	Enhancers	HepG2	liver
35	chr10:5671000-5673400	Weak transcription	Colonic Mucosa	Colon
36	chr10:5671000-5673800	Weak transcription	Fetal Muscle Trunk	muscle
37	chr10:5671000-5674000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr10:5671000-5674000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr10:5671000-5674200	Weak transcription	Aorta	Aorta
40	chr10:5671000-5674400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr10:5671000-5680400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr10:5671000-5680800	Weak transcription	Psoas Muscle	Psoas
43	chr10:5671000-5681000	Weak transcription	HUES64 Cell Line	embryonic stem cell
44	chr10:5671200-5672200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr10:5671200-5674000	Weak transcription	Fetal Kidney	kidney
46	chr10:5671200-5674200	Weak transcription	Fetal Lung	lung
47	chr10:5671200-5679800	Weak transcription	Brain Anterior Caudate	brain
48	chr10:5671200-5680400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr10:5671400-5672200	Enhancers	Stomach Smooth Muscle	stomach
50	chr10:5671400-5672200	Enhancers	NHLF	lung

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