Variant report

Variant	rs238780
Chromosome Location	chr22:22339489-22339490
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr22:22339364-22339523	MCF-7	breast:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
2	CTCF	chr22:22339400-22339550	GM12865	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
3	CTCF	chr22:22339317-22339592	GM12891	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
4	CTCF	chr22:22339340-22339490	HA-sp	spinal cord:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
5	CTCF	chr22:22339328-22339489	SK-N-SH_RA	brain:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
6	RAD21	chr22:22339217-22339675	ECC-1	luminal epithelium:	n/a	chr22:22339438-22339457 chr22:22339437-22339451 chr22:22339439-22339453
7	CTCF	chr22:22339313-22339564	ProgFib	skin:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
8	SMC3	chr22:22339275-22339656	GM12878	blood:	n/a	chr22:22339439-22339453 chr22:22339443-22339453
9	CTCF	chr22:22339360-22339510	HEK293	kidney:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
10	TAF1	chr22:22339264-22339868	K562	blood:	n/a	n/a
11	CTCF	chr22:22339440-22339590	NHEK	skin:	n/a	chr22:22339440-22339453 chr22:22339440-22339453
12	CTCF	chr22:22339360-22339552	GM19239	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
13	CTCF	chr22:22339360-22339510	AG09319	gingival:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
14	CTCF	chr22:22339380-22339530	HVMF	connective:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
15	CTCF	chr22:22339340-22339490	GM12867	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
16	CTCF	chr22:22339380-22339530	GM12875	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
17	CTCF	chr22:22339358-22339508	Medullo	brain:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
18	RUNX3	chr22:22339255-22339574	GM12878	blood:	n/a	n/a
19	CTCF	chr22:22339360-22339510	HPAF	blood vessel:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
20	CTCF	chr22:22339355-22339536	GM13976	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
21	CTCF	chr22:22339380-22339530	HepG2	liver:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
22	JUND	chr22:22339277-22339664	K562	blood:	n/a	n/a
23	CTCF	chr22:22339380-22339530	HCFaa	heart:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
24	CTCF	chr22:22339380-22339530	BE2_C	brain:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
25	NFYB	chr22:22339328-22339602	K562	blood:	n/a	n/a
26	ELK1	chr22:22339307-22339630	K562	blood:	n/a	n/a
27	CTCF	chr22:22339480-22339630	GM12868	blood:	n/a	n/a
28	MYC	chr22:22339287-22339693	K562	blood:	n/a	n/a
29	SMC3	chr22:22339225-22339700	K562	blood:	n/a	chr22:22339439-22339453 chr22:22339443-22339453
30	CTCF	chr22:22339322-22339561	GM12892	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
31	MAFK	chr22:22339157-22339796	K562	blood:	n/a	n/a
32	CTCF	chr22:22339333-22339546	A549	lung:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
33	CTCF	chr22:22339303-22339581	K562	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
34	MAX	chr22:22339316-22339700	K562	blood:	n/a	n/a
35	CTCF	chr22:22339380-22339530	GM12864	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
36	RAD21	chr22:22339216-22339563	A549	lung:	n/a	chr22:22339438-22339457 chr22:22339437-22339451 chr22:22339439-22339453
37	CTCF	chr22:22339354-22339518	Hela-S3	cervix:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
38	RCOR1	chr22:22339079-22339797	K562	blood:	n/a	n/a
39	RAD21	chr22:22339238-22339614	HepG2	liver:	n/a	chr22:22339438-22339457 chr22:22339437-22339451 chr22:22339439-22339453
40	CTCF	chr22:22339340-22339490	GM12871	blood:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
41	CTCF	chr22:22339360-22339510	HCT-116	colon:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
42	RAD21	chr22:22339317-22339563	SK-N-SH_RA	brain:	n/a	chr22:22339438-22339457 chr22:22339437-22339451 chr22:22339439-22339453
43	CTCF	chr22:22339380-22339530	HFF-Myc	foreskin:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
44	STAT5A	chr22:22338913-22339636	K562	blood:	n/a	chr22:22339350-22339361
45	CTCF	chr22:22339296-22339646	H1-hESC	embryonic stem cell:	n/a	chr22:22339440-22339453 chr22:22339438-22339454 chr22:22339440-22339453 chr22:22339437-22339455
46	SMC3	chr22:22339338-22339586	HepG2	liver:	n/a	chr22:22339439-22339453 chr22:22339443-22339453
47	ZNF143	chr22:22339284-22339604	H1-hESC	embryonic stem cell:	n/a	n/a
48	YY1	chr22:22339308-22339595	GM12878	blood:	n/a	n/a
49	FOXM1	chr22:22339202-22339747	GM12878	blood:	n/a	n/a
50	HEY1	chr22:22339300-22339722	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr22:22338933..22339882-chr22:22510840..22511767,5	K562	blood:
2	chr22:22336863..22339918-chr22:22415321..22421007,6	K562	blood:
3	chr22:22337036..22339918-chr22:22415321..22418287,3	K562	blood:
4	chr22:22337908..22340571-chr22:22464076..22466498,2	K562	blood:
5	chr22:22338264..22341028-chr22:22377177..22379400,2	K562	blood:
6	chr22:22339150..22339972-chr22:22457111..22457827,3	K562	blood:
7	chr22:22068976..22070805-chr22:22338625..22340951,2	K562	blood:
8	chr22:22289966..22298336-chr22:22332694..22342462,17	K562	blood:
9	chr22:22338264..22343041-chr22:22376495..22378677,4	K562	blood:
10	chr22:22337436..22340335-chr22:22341477..22343110,2	MCF-7	breast:

Variant related genes	Relation type
TOP3B	TF binding region
ENSG00000100034	Chromatin interaction
ENSG00000254075	Chromatin interaction
ENSG00000224086	Chromatin interaction
ENSG00000225741	Chromatin interaction

Extended variants
information (count: 245 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs16985625	1.00[EUR][1000 genomes]
rs171254	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs171276	1.00[MEX][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs238779	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240050	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240052	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240059	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240063	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240617	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240618	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs240620	1.00[EUR][1000 genomes]
rs389929	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs462496	1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55710707	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56031527	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56091280	1.00[EUR][1000 genomes]
rs57001004	1.00[EUR][1000 genomes]
rs57468132	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57891800	1.00[EUR][1000 genomes]
rs58541082	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59378807	1.00[EUR][1000 genomes]
rs5999452	1.00[EUR][1000 genomes]
rs5999614	1.00[EUR][1000 genomes]
rs5999704	1.00[EUR][1000 genomes]
rs5999785	1.00[EUR][1000 genomes]
rs5999880	1.00[EUR][1000 genomes]
rs5999887	1.00[EUR][1000 genomes]
rs5999891	1.00[EUR][1000 genomes]
rs6000479	1.00[EUR][1000 genomes]
rs6000497	1.00[EUR][1000 genomes]
rs60142295	1.00[EUR][1000 genomes]
rs60882067	1.00[EUR][1000 genomes]
rs61127309	1.00[EUR][1000 genomes]
rs61162606	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61336350	1.00[EUR][1000 genomes]
rs6518997	1.00[EUR][1000 genomes]
rs6519019	1.00[EUR][1000 genomes]
rs7284924	1.00[EUR][1000 genomes]
rs7286970	1.00[EUR][1000 genomes]
rs73386262	1.00[EUR][1000 genomes]
rs73386274	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73388136	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73388154	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73388182	1.00[EUR][1000 genomes]
rs73877678	1.00[EUR][1000 genomes]
rs73877693	1.00[EUR][1000 genomes]
rs743533	1.00[EUR][1000 genomes]
rs8136902	1.00[EUR][1000 genomes]
rs8139215	1.00[EUR][1000 genomes]
rs86080	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:195 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948603	chr22:21928916-22601814	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	422 gene(s)	inside rSNPs	diseases
2	nsv948902	chr22:21928916-22657900	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	426 gene(s)	inside rSNPs	diseases
3	nsv1063962	chr22:21939722-22934593	Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	477 gene(s)	inside rSNPs	diseases
4	nsv1058617	chr22:21939922-22934454	Weak transcription Bivalent Enhancer Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	477 gene(s)	inside rSNPs	diseases
5	nsv529694	chr22:21957411-22905068	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	474 gene(s)	inside rSNPs	diseases
6	nsv531797	chr22:21977700-22959729	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	476 gene(s)	inside rSNPs	diseases
7	nsv1066403	chr22:22010822-22352262	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
8	nsv948580	chr22:22100718-22839559	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
9	nsv1059265	chr22:22131125-22457154	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
10	esv3379268	chr22:22135347-22446281	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
11	esv2752404	chr22:22141825-22570417	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
12	esv2422277	chr22:22144108-22442159	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
13	esv2422295	chr22:22144108-22442159	Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
14	esv2422374	chr22:22152248-22595246	Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
15	esv2422403	chr22:22152248-23112582	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
16	nsv1062641	chr22:22157661-22367697	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
17	esv2422390	chr22:22157964-23112582	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
18	esv2763701	chr22:22173533-22573987	Weak transcription Bivalent Enhancer Genic enhancers Enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
19	esv2422372	chr22:22198324-22731587	Strong transcription Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
20	esv2422362	chr22:22198357-23125553	Enhancers Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
21	esv2422446	chr22:22198357-23127963	Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
22	esv2422338	chr22:22210933-22417406	Genic enhancers Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
23	esv2422223	chr22:22210933-22700941	Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
24	esv2422217	chr22:22217341-23120076	Genic enhancers Enhancers Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
25	esv2422394	chr22:22220046-22543157	Active TSS Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
26	nsv469782	chr22:22249118-22423071	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
27	nsv834146	chr22:22249119-22423071	Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
28	nsv914473	chr22:22266577-22349088	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
29	nsv1062823	chr22:22272078-22541865	Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
30	nsv1056132	chr22:22272229-22440499	Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
31	esv2756316	chr22:22275642-22570417	Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
32	nsv828966	chr22:22277124-22350308	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
33	nsv432177	chr22:22282776-22570446	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
34	nsv588323	chr22:22284513-22573637	Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
35	nsv516394	chr22:22290403-22584255	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
36	nsv588324	chr22:22292995-22573637	Genic enhancers Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases
37	nsv1060215	chr22:22292995-22573975	Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases
38	esv2758537	chr22:22295103-22408604	Active TSS Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
39	esv2758826	chr22:22295103-22408604	Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
40	esv2422458	chr22:22296499-22573631	Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
41	nsv1058463	chr22:22297647-22468619	Strong transcription Enhancers Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
42	nsv1060212	chr22:22297647-22573975	Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
43	nsv1059964	chr22:22297647-22579822	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
44	nsv1065598	chr22:22297647-22597978	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
45	nsv1063502	chr22:22297716-22573431	Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
46	nsv1059754	chr22:22297922-22573975	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
47	nsv1055443	chr22:22297922-22582073	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
48	esv2422343	chr22:22298025-23112582	Bivalent Enhancer Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
49	nsv914475	chr22:22300941-22386617	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
50	nsv914476	chr22:22300941-22517826	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:22337400-22345000	Weak transcription	Spleen	Spleen
2	chr22:22337600-22342600	Weak transcription	Fetal Muscle Leg	muscle
3	chr22:22339000-22339800	Strong transcription	Right Atrium	heart
4	chr22:22339000-22339800	Enhancers	GM12878-XiMat	blood
5	chr22:22339400-22339600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
6	chr22:22339400-22339800	Flanking Active TSS	K562	blood

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