Variant report

Variant rs5999704
Chromosome Location chr22:22178791-22178792
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22161600-22182000 Weak transcription Placenta Amnion Placenta Amnion
2 chr22:22171400-22186800 Weak transcription A549 lung
3 chr22:22171600-22183600 Enhancers Primary T helper cells fromperipheralblood blood
4 chr22:22171800-22181200 Weak transcription Stomach Smooth Muscle stomach
5 chr22:22171800-22181600 Weak transcription Rectal Smooth Muscle rectum
6 chr22:22172000-22182000 Weak transcription Esophagus oesophagus
7 chr22:22172200-22181400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr22:22172400-22186600 Weak transcription HSMM muscle
9 chr22:22172600-22186600 Weak transcription Fetal Intestine Small intestine
10 chr22:22173200-22189600 Weak transcription Brain Germinal Matrix brain
11 chr22:22173400-22178800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr22:22173800-22182000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr22:22173800-22186000 Weak transcription Dnd41 blood
14 chr22:22173800-22189000 Weak transcription Fetal Thymus thymus
15 chr22:22174000-22179800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr22:22174000-22179800 Weak transcription Brain Cingulate Gyrus brain
17 chr22:22174000-22181200 Weak transcription Brain Substantia Nigra brain
18 chr22:22174000-22181200 Weak transcription Colon Smooth Muscle Colon
19 chr22:22174000-22181600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr22:22174000-22181600 Weak transcription Duodenum Mucosa Duodenum
21 chr22:22174000-22181600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr22:22174000-22182400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr22:22174000-22186800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr22:22174000-22186800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr22:22174000-22187200 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr22:22174000-22191800 Weak transcription H9 Cell Line embryonic stem cell
27 chr22:22174200-22181600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr22:22174200-22186800 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr22:22174200-22189200 Weak transcription Fetal Stomach stomach
30 chr22:22174600-22178800 Weak transcription Brain Anterior Caudate brain
31 chr22:22174600-22181400 Weak transcription Brain Hippocampus Middle brain
32 chr22:22174600-22187000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr22:22174600-22189200 Weak transcription Small Intestine intestine
34 chr22:22174600-22189800 Weak transcription Primary T cells from cord blood blood
35 chr22:22174600-22191800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr22:22174800-22179000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr22:22174800-22185800 Weak transcription Fetal Muscle Trunk muscle
38 chr22:22174800-22186600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr22:22174800-22186600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr22:22175000-22182000 Weak transcription Psoas Muscle Psoas
41 chr22:22175000-22186600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr22:22175600-22179600 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr22:22176200-22179600 Enhancers Primary T cells fromperipheralblood blood
44 chr22:22176600-22180800 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr22:22176600-22181800 Weak transcription Spleen Spleen
46 chr22:22176600-22182000 Weak transcription Gastric stomach
47 chr22:22176800-22180800 Enhancers Primary T helper cells PMA-I stimulated --
48 chr22:22177000-22179400 Enhancers Adipose Nuclei Adipose
49 chr22:22177200-22179400 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr22:22177200-22185200 Enhancers Primary T helper naive cells fromperipheralblood blood

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