The 2.0 version of rSNPBase

Variant report

Variant rs240400
Chromosome Location chr6:75981026-75981027
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:75953800-75982200 Weak transcription Spleen Spleen
2 chr6:75954400-75986000 Weak transcription Brain Germinal Matrix brain
3 chr6:75954600-75982400 Weak transcription Brain Cingulate Gyrus brain
4 chr6:75954800-75982200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr6:75954800-75988200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr6:75960600-75981400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr6:75967800-75988200 Weak transcription Fetal Brain Male brain
8 chr6:75968600-75981600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr6:75969400-75981400 Weak transcription Muscle Satellite Cultured Cells --
10 chr6:75969600-75983800 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr6:75969600-75992200 Weak transcription Colonic Mucosa Colon
12 chr6:75970000-75992400 Weak transcription Brain Substantia Nigra brain
13 chr6:75970200-75982000 Weak transcription Brain Hippocampus Middle brain
14 chr6:75973000-75985200 Weak transcription HepG2 liver
15 chr6:75973200-75982200 Weak transcription Thymus Thymus
16 chr6:75973200-75985000 Weak transcription Placenta Amnion Placenta Amnion
17 chr6:75973400-75985600 Weak transcription Lung lung
18 chr6:75973400-75988200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr6:75973800-75982200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:75974000-75981600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr6:75974000-75982000 Weak transcription Primary hematopoietic stem cells blood
22 chr6:75974000-75982200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr6:75974000-75986200 Weak transcription K562 blood
24 chr6:75974000-75988000 Weak transcription Stomach Smooth Muscle stomach
25 chr6:75974200-75981400 Weak transcription Adipose Nuclei Adipose
26 chr6:75974200-75982400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr6:75974200-75993000 Weak transcription Placenta Placenta
28 chr6:75974400-75981600 Weak transcription Fetal Thymus thymus
29 chr6:75974800-75981600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr6:75974800-75982000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr6:75974800-75989800 Weak transcription Fetal Brain Female brain
32 chr6:75975000-75981400 Weak transcription Primary monocytes fromperipheralblood blood
33 chr6:75975000-75988200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr6:75975000-75992400 Weak transcription Fetal Stomach stomach
35 chr6:75975400-75981600 Weak transcription Primary B cells from peripheral blood blood
36 chr6:75975400-75982000 Weak transcription Primary T cells fromperipheralblood blood
37 chr6:75975600-75981200 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr6:75975600-75982000 Weak transcription Fetal Intestine Large intestine
39 chr6:75975600-75982200 Weak transcription Primary T cells from cord blood blood
40 chr6:75975600-75982200 Weak transcription Fetal Muscle Trunk muscle
41 chr6:75975800-75981800 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr6:75976000-75982400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr6:75977200-75981400 Weak transcription Fetal Lung lung
44 chr6:75977400-75981800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr6:75977400-75982000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:75977600-75981400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:75977600-75981600 Weak transcription Colon Smooth Muscle Colon
48 chr6:75977800-75981600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr6:75978200-75982000 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr6:75978200-75982400 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015