Variant report

Variant rs2412729
Chromosome Location chr4:56921591-56921592
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56916400-56936200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr4:56916600-56921600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:56916600-56929400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:56916600-56931600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:56916600-56934200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr4:56917200-56921600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr4:56917200-56922400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr4:56917200-56923600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr4:56917200-56934600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr4:56917800-56921600 Weak transcription Fetal Kidney kidney
11 chr4:56919200-56921600 Weak transcription Fetal Lung lung
12 chr4:56919400-56921600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr4:56920200-56922000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr4:56920200-56922200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
15 chr4:56920600-56921600 Weak transcription H9 Cell Line embryonic stem cell
16 chr4:56920600-56922000 Enhancers Fetal Brain Male brain
17 chr4:56921000-56921800 Flanking Active TSS Fetal Brain Female brain
18 chr4:56921000-56922000 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr4:56921000-56922000 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr4:56921000-56922200 Enhancers HUES64 Cell Line embryonic stem cell
21 chr4:56921000-56922200 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr4:56921000-56922200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr4:56921000-56922400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr4:56921000-56922400 Enhancers HUES48 Cell Line embryonic stem cell
25 chr4:56921000-56922600 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr4:56921000-56922600 Enhancers Duodenum Mucosa Duodenum
27 chr4:56921000-56923600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr4:56921200-56922000 Enhancers ES-WA7 Cell Line embryonic stem cell
29 chr4:56921200-56922200 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr4:56921200-56922200 Enhancers Primary hematopoietic stem cells blood
31 chr4:56921200-56922200 Flanking Active TSS Brain Germinal Matrix brain
32 chr4:56921200-56922600 Enhancers HUES6 Cell Line embryonic stem cell
33 chr4:56921200-56922600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr4:56921200-56923000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr4:56921200-56923800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr4:56921200-56923800 Enhancers Fetal Intestine Large intestine
37 chr4:56921200-56923800 Enhancers Fetal Intestine Small intestine
38 chr4:56921200-56923800 Enhancers HepG2 liver
39 chr4:56921400-56922000 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr4:56921400-56922200 Enhancers H1 Cell Line embryonic stem cell

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