Variant report
| Variant | rs2416527 |
|---|---|
| Chromosome Location | chr5:107552440-107552441 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:107516200-107584800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 2 | chr5:107517000-107571800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 3 | chr5:107546200-107553200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 4 | chr5:107546600-107590800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 5 | chr5:107547000-107577200 | Weak transcription | Fetal Intestine Large | intestine |
| 6 | chr5:107548800-107556000 | Weak transcription | Left Ventricle | heart |
| 7 | chr5:107549200-107578000 | Weak transcription | Pancreas | Pancrea |
| 8 | chr5:107549400-107552600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr5:107549400-107552600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr5:107549400-107557600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr5:107549400-107561200 | Weak transcription | Fetal Intestine Small | intestine |
| 12 | chr5:107550000-107552600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr5:107550200-107561400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr5:107550600-107552600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 15 | chr5:107550800-107553000 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr5:107550800-107559400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 17 | chr5:107551000-107553400 | Weak transcription | Fetal Lung | lung |
| 18 | chr5:107551200-107559000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr5:107551200-107569000 | Weak transcription | Primary T cells from cord blood | blood |
| 20 | chr5:107551400-107560600 | Weak transcription | Liver | Liver |
| 21 | chr5:107551400-107561600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 22 | chr5:107551800-107553400 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 23 | chr5:107551800-107556000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 24 | chr5:107551800-107567200 | Weak transcription | Primary B cells from cord blood | blood |
| 25 | chr5:107551800-107568800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 26 | chr5:107551800-107569600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 27 | chr5:107552000-107578800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 28 | chr5:107552000-107585000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 29 | chr5:107552400-107553000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 30 | chr5:107552400-107553000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 31 | chr5:107552400-107553000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 32 | chr5:107552400-107553000 | Enhancers | HSMM | muscle |
| 33 | chr5:107552400-107553000 | Enhancers | Osteobl | bone |
| 34 | chr5:107552400-107553200 | Enhancers | Fetal Heart | heart |
| 35 | chr5:107552400-107553600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 36 | chr5:107552400-107553600 | Enhancers | NH-A | brain |
