The 2.0 version of rSNPBase

Variant report

Variant rs2416942
Chromosome Location chr9:102706489-102706490
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:102669800-102729800 Weak transcription Small Intestine intestine
2 chr9:102671200-102719200 Weak transcription Fetal Heart heart
3 chr9:102680000-102710800 Weak transcription HUVEC blood vessel
4 chr9:102680400-102724800 Weak transcription HSMM muscle
5 chr9:102682600-102751400 Weak transcription NH-A brain
6 chr9:102684400-102720600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr9:102685000-102710000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr9:102685000-102731600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr9:102685200-102730200 Weak transcription NHLF lung
10 chr9:102686200-102730000 Weak transcription Colonic Mucosa Colon
11 chr9:102686400-102712800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr9:102686400-102713000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr9:102686400-102723400 Weak transcription Colon Smooth Muscle Colon
14 chr9:102686400-102750800 Weak transcription Esophagus oesophagus
15 chr9:102686600-102713400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr9:102686600-102730800 Weak transcription Ovary ovary
17 chr9:102686600-102750800 Weak transcription Gastric stomach
18 chr9:102686800-102722800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr9:102687800-102722200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr9:102688200-102713400 Weak transcription Dnd41 blood
21 chr9:102688400-102710800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr9:102689400-102713400 Weak transcription Left Ventricle heart
23 chr9:102689400-102713400 Weak transcription Rectal Smooth Muscle rectum
24 chr9:102692800-102713400 Weak transcription Fetal Thymus thymus
25 chr9:102693000-102723000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr9:102694000-102713400 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr9:102694000-102721600 Weak transcription Fetal Stomach stomach
28 chr9:102698400-102728600 Weak transcription HMEC breast
29 chr9:102698400-102728800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr9:102698600-102713600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr9:102699600-102713000 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr9:102699600-102713400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr9:102699800-102711000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr9:102699800-102713000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr9:102699800-102713200 Weak transcription Primary T cells from cord blood blood
36 chr9:102699800-102713200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr9:102699800-102713400 Weak transcription Primary T cells fromperipheralblood blood
38 chr9:102699800-102713400 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr9:102699800-102713400 Weak transcription Liver Liver
40 chr9:102699800-102713400 Weak transcription Duodenum Mucosa Duodenum
41 chr9:102699800-102713400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr9:102699800-102713400 Weak transcription Fetal Intestine Large intestine
43 chr9:102699800-102722000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr9:102699800-102739800 Weak transcription K562 blood
45 chr9:102699800-102765800 Weak transcription Psoas Muscle Psoas
46 chr9:102700000-102728600 Weak transcription A549 lung
47 chr9:102700200-102713200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr9:102700200-102713400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr9:102700400-102713800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr9:102700600-102707400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015