Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:32468457..32470421-chr11:32472103..32475103,3	K562	blood:
2	chr11:32472024..32473812-chr11:32475588..32478251,3	K562	blood:
3	chr11:32472073..32474042-chr11:32651003..32653929,2	K562	blood:
4	chr11:32470724..32474567-chr11:32604115..32608445,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EIF3M-2	chr11:32473567-32473677	ENSG00000183242

Variant related genes	Relation type
ENSG00000149100	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10742278	0.80[ASN][1000 genomes]
rs10767936	0.82[ASN][1000 genomes]
rs10767937	0.80[ASN][1000 genomes]
rs10767938	0.82[ASN][1000 genomes]
rs10835913	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10835914	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10835915	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11031787	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11031788	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11031790	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12575247	0.83[AMR][1000 genomes]
rs1799925	0.83[AMR][1000 genomes]
rs2073187	0.82[ASN][1000 genomes]
rs2900753	0.82[EUR][1000 genomes]
rs34163689	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3858451	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3858453	0.80[ASN][1000 genomes]
rs3858457	0.82[ASN][1000 genomes]
rs59518979	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61889251	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61889255	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61889256	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7103128	0.82[ASN][1000 genomes]
rs7115829	0.82[ASN][1000 genomes]
rs975665	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv2753303	chr11:32447324-32494924	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32469000-32487800	Weak transcription	Ovary	ovary
2	chr11:32473400-32476600	Weak transcription	Right Atrium	heart
3	chr11:32473600-32474800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr11:32473600-32474800	Weak transcription	K562	blood

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