Variant report
| Variant | rs2424527 |
|---|---|
| Chromosome Location | chr20:23357329-23357330 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:23344000-23392600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr20:23344800-23362400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 3 | chr20:23345000-23361800 | Strong transcription | Fetal Thymus | thymus |
| 4 | chr20:23345000-23362000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr20:23345000-23362600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 6 | chr20:23346600-23363200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 7 | chr20:23346800-23362600 | Weak transcription | Right Atrium | heart |
| 8 | chr20:23347200-23362400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr20:23347400-23362000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 10 | chr20:23347600-23358600 | Strong transcription | Primary T cells from cord blood | blood |
| 11 | chr20:23347800-23362000 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 12 | chr20:23347800-23362200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 13 | chr20:23347800-23362600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 14 | chr20:23348000-23374200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 15 | chr20:23348200-23384800 | Weak transcription | Stomach Mucosa | stomach |
| 16 | chr20:23348400-23358200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 17 | chr20:23348400-23362000 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 18 | chr20:23348600-23358800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 19 | chr20:23348600-23362400 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 20 | chr20:23348600-23363000 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 21 | chr20:23348800-23358000 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr20:23348800-23358200 | Strong transcription | NH-A | brain |
| 23 | chr20:23348800-23362000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 24 | chr20:23348800-23363000 | Strong transcription | GM12878-XiMat | blood |
| 25 | chr20:23348800-23366400 | Strong transcription | Dnd41 | blood |
| 26 | chr20:23349000-23358800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr20:23349200-23359000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 28 | chr20:23349200-23359000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 29 | chr20:23349200-23359200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 30 | chr20:23349200-23359400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 31 | chr20:23349200-23360400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 32 | chr20:23349200-23363000 | Strong transcription | Adipose Nuclei | Adipose |
| 33 | chr20:23349400-23358000 | Strong transcription | Brain Cingulate Gyrus | brain |
| 34 | chr20:23349400-23358000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr20:23349400-23358200 | Strong transcription | Primary hematopoietic stem cells | blood |
| 36 | chr20:23349400-23358200 | Strong transcription | Fetal Brain Female | brain |
| 37 | chr20:23349400-23358200 | Strong transcription | Fetal Intestine Large | intestine |
| 38 | chr20:23349400-23358800 | Strong transcription | Left Ventricle | heart |
| 39 | chr20:23349400-23359000 | Strong transcription | Fetal Muscle Leg | muscle |
| 40 | chr20:23349400-23363200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 41 | chr20:23349600-23357800 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr20:23349600-23358000 | Strong transcription | K562 | blood |
| 43 | chr20:23349600-23358200 | Strong transcription | NHDF-Ad | bronchial |
| 44 | chr20:23349600-23358600 | Strong transcription | HSMM | muscle |
| 45 | chr20:23349600-23358800 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 46 | chr20:23349600-23358800 | Strong transcription | Stomach Smooth Muscle | stomach |
| 47 | chr20:23349600-23358800 | Strong transcription | NHLF | lung |
| 48 | chr20:23349600-23359000 | Strong transcription | Brain Anterior Caudate | brain |
| 49 | chr20:23349600-23359000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 50 | chr20:23349600-23363600 | Strong transcription | Liver | Liver |
