Variant report

Variant rs2424572
Chromosome Location chr20:23607379-23607380
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23600600-23617000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr20:23602000-23609400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr20:23602000-23610000 Weak transcription H9 Cell Line embryonic stem cell
4 chr20:23602000-23610200 Weak transcription Lung lung
5 chr20:23602000-23612200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr20:23602000-23616800 Weak transcription H1 Cell Line embryonic stem cell
7 chr20:23603800-23609200 Weak transcription Fetal Muscle Trunk muscle
8 chr20:23603800-23609800 Weak transcription Fetal Thymus thymus
9 chr20:23603800-23615400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr20:23604000-23607400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr20:23604000-23607400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr20:23604000-23608800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr20:23604000-23608800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr20:23604000-23609600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr20:23604000-23610200 Weak transcription Ovary ovary
16 chr20:23604000-23612200 Weak transcription Liver Liver
17 chr20:23604000-23612800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr20:23604000-23613000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr20:23604000-23613000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr20:23604000-23613400 Weak transcription Brain Hippocampus Middle brain
21 chr20:23604000-23614400 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr20:23604000-23616600 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr20:23604000-23616800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr20:23604200-23607600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr20:23604200-23607600 Enhancers HMEC breast
26 chr20:23604200-23607600 Enhancers NHEK skin
27 chr20:23604200-23609200 Weak transcription HUVEC blood vessel
28 chr20:23604200-23609200 Weak transcription Osteobl bone
29 chr20:23604200-23609800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr20:23604200-23610000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr20:23604200-23615000 Weak transcription Brain Anterior Caudate brain
32 chr20:23604800-23608800 Weak transcription Left Ventricle heart
33 chr20:23604800-23609000 Weak transcription Fetal Intestine Small intestine
34 chr20:23604800-23612200 Weak transcription Aorta Aorta
35 chr20:23605000-23609200 Weak transcription Adipose Nuclei Adipose
36 chr20:23605000-23611800 Weak transcription Fetal Muscle Leg muscle
37 chr20:23605000-23612800 Weak transcription Rectal Smooth Muscle rectum
38 chr20:23605200-23612200 Weak transcription NHLF lung
39 chr20:23605400-23609600 Weak transcription Muscle Satellite Cultured Cells --
40 chr20:23605400-23612200 Weak transcription Stomach Smooth Muscle stomach
41 chr20:23605800-23607600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr20:23606000-23609600 Weak transcription NHDF-Ad bronchial
43 chr20:23606200-23607400 Enhancers Cortex derived primary cultured neurospheres brain
44 chr20:23606400-23607400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr20:23606400-23607400 Enhancers Placenta Placenta
46 chr20:23606400-23607400 Enhancers Monocytes-CD14+_RO01746 blood
47 chr20:23606400-23607600 Enhancers Stomach Mucosa stomach
48 chr20:23606600-23607400 Enhancers Fetal Intestine Large intestine
49 chr20:23606600-23607400 Enhancers Sigmoid Colon Sigmoid Colon
50 chr20:23606600-23607400 Enhancers K562 blood

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