Variant report

Variant rs2438389
Chromosome Location chr12:104252593-104252594
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104236000-104252600 Weak transcription Esophagus oesophagus
2 chr12:104236000-104252600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr12:104236000-104253600 Weak transcription Gastric stomach
4 chr12:104240000-104254800 Enhancers Rectal Smooth Muscle rectum
5 chr12:104246400-104252600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr12:104246600-104253200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr12:104246800-104254000 Weak transcription Brain Anterior Caudate brain
8 chr12:104248800-104252800 Weak transcription Fetal Stomach stomach
9 chr12:104249600-104252600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr12:104249800-104252600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr12:104250000-104252600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr12:104250000-104257000 Weak transcription Pancreas Pancrea
13 chr12:104250000-104263800 Weak transcription Liver Liver
14 chr12:104250400-104254000 Weak transcription Ovary ovary
15 chr12:104250600-104252600 Weak transcription Osteobl bone
16 chr12:104251000-104253400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr12:104251200-104254400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr12:104251400-104252800 Enhancers HepG2 liver
19 chr12:104251400-104254400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr12:104252000-104252600 ZNF genes & repeats Fetal Intestine Small intestine
21 chr12:104252000-104254000 Enhancers HSMMtube muscle
22 chr12:104252000-104254400 Enhancers Muscle Satellite Cultured Cells --
23 chr12:104252200-104252800 Enhancers Hela-S3 cervix
24 chr12:104252200-104254400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr12:104252200-104254400 Enhancers HSMM muscle
26 chr12:104252200-104254600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr12:104252200-104254800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr12:104252200-104254800 Enhancers Stomach Smooth Muscle stomach
29 chr12:104252200-104255000 Enhancers HMEC breast
30 chr12:104252200-104255800 Enhancers Placenta Placenta
31 chr12:104252400-104252600 Enhancers Placenta Amnion Placenta Amnion
32 chr12:104252400-104252600 Enhancers Rectal Mucosa Donor 31 rectum
33 chr12:104252400-104252600 Enhancers A549 lung
34 chr12:104252400-104252800 Enhancers NHEK skin
35 chr12:104252400-104253800 Enhancers Fetal Intestine Large intestine
36 chr12:104252400-104254000 Enhancers Rectal Mucosa Donor 29 rectum
37 chr12:104252400-104254000 Enhancers NH-A brain
38 chr12:104252400-104254200 Enhancers NHLF lung
39 chr12:104252400-104254400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr12:104252400-104254400 Enhancers NHDF-Ad bronchial
41 chr12:104252400-104255000 Enhancers Colon Smooth Muscle Colon

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