Variant report

Variant	rs2468536
Chromosome Location	chr5:36464452-36464453
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10061011	0.86[AMR][1000 genomes]
rs2455277	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2455279	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2468502	0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2468503	0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2468504	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2468509	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv597819	chr5:36445458-36472990	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36457800-36468000	Weak transcription	Fetal Heart	heart
2	chr5:36463200-36467400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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