Variant report

Variant	rs247095
Chromosome Location	chr5:128093756-128093757
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10054780	0.84[ASN][1000 genomes]
rs1422443	0.88[ASN][1000 genomes]
rs1603409	0.80[ASN][1000 genomes]
rs173520	0.96[ASN][1000 genomes]
rs189687	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs247097	1.00[ASN][1000 genomes]
rs247099	1.00[ASN][1000 genomes]
rs247100	1.00[ASN][1000 genomes]
rs247180	0.82[ASN][1000 genomes]
rs247209	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4835959	0.88[ASN][1000 genomes]
rs4836402	1.00[ASN][1000 genomes]
rs6595859	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023405	chr5:127955360-128190069	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv882836	chr5:127999225-128136519	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:128092600-128094000	Enhancers	Fetal Lung	lung
2	chr5:128093200-128098600	Weak transcription	Fetal Stomach	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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