Variant report

Variant rs2471602
Chromosome Location chr12:46942235-46942236
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:46928400-46948600 Weak transcription Rectal Smooth Muscle rectum
2 chr12:46939600-46944200 Enhancers Skeletal Muscle Female skeletal muscle
3 chr12:46940000-46942400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:46940000-46945600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr12:46940200-46943400 Enhancers K562 blood
6 chr12:46940200-46944000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
7 chr12:46940200-46944200 Enhancers HSMM muscle
8 chr12:46940200-46945400 Enhancers Muscle Satellite Cultured Cells --
9 chr12:46940200-46950400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr12:46940200-46955000 Enhancers HMEC breast
11 chr12:46940400-46942400 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr12:46940400-46942600 Enhancers Adipose Nuclei Adipose
13 chr12:46940400-46942800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr12:46940400-46942800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr12:46940400-46942800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr12:46940400-46943400 Enhancers Hela-S3 cervix
17 chr12:46940400-46943400 Enhancers Osteobl bone
18 chr12:46940400-46944000 Enhancers HSMMtube muscle
19 chr12:46940400-46944400 Enhancers NHLF lung
20 chr12:46940400-46944600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr12:46940600-46943800 Enhancers Placenta Placenta
22 chr12:46940600-46944400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr12:46940600-46953600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr12:46940800-46947200 Enhancers NHDF-Ad bronchial
25 chr12:46941000-46943400 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr12:46941000-46944000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr12:46941000-46944400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr12:46941000-46949200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr12:46941200-46943600 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr12:46941200-46944000 Enhancers Primary T cells from cord blood blood
31 chr12:46941400-46942400 Weak transcription GM12878-XiMat blood
32 chr12:46941400-46956200 Weak transcription Primary B cells from cord blood blood
33 chr12:46941600-46942400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr12:46941600-46942600 Enhancers Fetal Heart heart
35 chr12:46941600-46943200 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr12:46941600-46943400 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr12:46941800-46942600 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr12:46941800-46943000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr12:46941800-46943400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr12:46941800-46944400 Enhancers HUVEC blood vessel
41 chr12:46941800-46944800 Weak transcription Primary B cells from peripheral blood blood
42 chr12:46942000-46943000 Weak transcription Psoas Muscle Psoas
43 chr12:46942000-46943200 Enhancers Skeletal Muscle Male skeletal muscle
44 chr12:46942000-46943200 Weak transcription Thymus Thymus
45 chr12:46942000-46943400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr12:46942000-46944200 Enhancers NH-A brain
47 chr12:46942000-46947000 Weak transcription Fetal Muscle Leg muscle
48 chr12:46942200-46942600 Weak transcription Primary monocytes fromperipheralblood blood
49 chr12:46942200-46942600 Flanking Active TSS NHEK skin
50 chr12:46942200-46943200 Weak transcription Primary T helper cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links