Variant report

Variant rs2471605
Chromosome Location chr12:46950111-46950112
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:46940200-46950400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:46940200-46955000 Enhancers HMEC breast
3 chr12:46940600-46953600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr12:46941400-46956200 Weak transcription Primary B cells from cord blood blood
5 chr12:46947200-46956000 Weak transcription Left Ventricle heart
6 chr12:46948200-46952400 Enhancers Adipose Nuclei Adipose
7 chr12:46948400-46950200 Enhancers Fetal Kidney kidney
8 chr12:46948600-46950600 Enhancers Rectal Smooth Muscle rectum
9 chr12:46948600-46954200 Enhancers Colon Smooth Muscle Colon
10 chr12:46948800-46950200 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr12:46948800-46950400 Enhancers Fetal Stomach stomach
12 chr12:46949000-46954000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr12:46949000-46954000 Weak transcription Aorta Aorta
14 chr12:46949200-46950200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr12:46949200-46950200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:46949200-46950400 Enhancers HUES64 Cell Line embryonic stem cell
17 chr12:46949200-46950400 Enhancers K562 blood
18 chr12:46949200-46951000 Enhancers HUVEC blood vessel
19 chr12:46949400-46950200 Enhancers HepG2 liver
20 chr12:46949400-46950400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr12:46949400-46950400 Enhancers Liver Liver
22 chr12:46949400-46954400 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr12:46949600-46950200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr12:46949600-46950200 Flanking Active TSS A549 lung
25 chr12:46949600-46950400 Enhancers Pancreatic Islets Pancreatic Islet
26 chr12:46949600-46950400 Flanking Active TSS NHEK skin
27 chr12:46949800-46950200 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr12:46949800-46950200 Active TSS Fetal Lung lung
29 chr12:46949800-46950200 Enhancers NHLF lung
30 chr12:46949800-46950400 Enhancers Fetal Heart heart
31 chr12:46949800-46950800 Weak transcription Fetal Muscle Leg muscle
32 chr12:46949800-46951200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr12:46949800-46951200 Enhancers Skeletal Muscle Male skeletal muscle
34 chr12:46949800-46951800 Weak transcription Psoas Muscle Psoas
35 chr12:46950000-46950200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr12:46950000-46950200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
37 chr12:46950000-46950200 Enhancers Stomach Smooth Muscle stomach
38 chr12:46950000-46950400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr12:46950000-46950800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr12:46950000-46950800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr12:46950000-46950800 Weak transcription HSMMtube muscle
42 chr12:46950000-46950800 Enhancers NHDF-Ad bronchial
43 chr12:46950000-46951000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr12:46950000-46951000 Enhancers Muscle Satellite Cultured Cells --
45 chr12:46950000-46951800 Enhancers NH-A brain
46 chr12:46950000-46952200 Enhancers Placenta Amnion Placenta Amnion
47 chr12:46950000-46952200 Enhancers HSMM muscle
48 chr12:46950000-46952600 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr12:46950000-46953600 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr12:46950000-46953600 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links