Variant report
| Variant | rs2471913 |
|---|---|
| Chromosome Location | chr7:151016002-151016003 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:5)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:5 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:151015827..151017496-chr7:151044887..151046581,2 | K562 | blood: | |
| 2 | chr7:151015904..151017496-chr7:151044887..151047703,2 | K562 | blood: | |
| 3 | chr7:151013126..151016006-chr7:151088424..151091352,2 | K562 | blood: | |
| 4 | chr7:151013498..151016044-chr7:151046792..151049523,2 | K562 | blood: | |
| 5 | chr7:151013058..151017462-chr7:151018233..151022450,5 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000013374 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs10224549 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs10276600 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11981958 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2471914 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2471915 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2471916 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2487158 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2792439 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6960923 | 0.95[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6961795 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
