The 2.0 version of rSNPBase

Variant report

Variant rs2476185
Chromosome Location chr1:62520510-62520511
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62458800-62521400 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr1:62459000-62530600 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr1:62459200-62550000 Weak transcription Primary T cells fromperipheralblood blood
4 chr1:62460000-62544600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr1:62469000-62533600 Weak transcription Rectal Smooth Muscle rectum
6 chr1:62484400-62523000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:62484400-62562200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:62488400-62521200 Weak transcription Ovary ovary
9 chr1:62494600-62524400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:62494600-62524400 Weak transcription Esophagus oesophagus
11 chr1:62495200-62544800 Weak transcription Liver Liver
12 chr1:62502200-62520600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:62504800-62531400 Weak transcription Aorta Aorta
14 chr1:62507200-62523000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr1:62507200-62523600 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr1:62507400-62524600 Weak transcription HepG2 liver
17 chr1:62508200-62628400 Weak transcription Colonic Mucosa Colon
18 chr1:62508800-62532000 Weak transcription Fetal Stomach stomach
19 chr1:62511400-62531600 Weak transcription Stomach Smooth Muscle stomach
20 chr1:62511400-62531800 Weak transcription NHEK skin
21 chr1:62511600-62522600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:62511600-62522800 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:62511600-62531200 Weak transcription Lung lung
24 chr1:62511800-62521600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:62511800-62522600 Weak transcription Psoas Muscle Psoas
26 chr1:62511800-62523200 Weak transcription Fetal Heart heart
27 chr1:62511800-62529600 Weak transcription Right Atrium heart
28 chr1:62512200-62524200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr1:62514000-62522800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:62514000-62522800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:62514000-62522800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr1:62514000-62524400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:62515200-62523200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:62515400-62552400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:62515800-62522600 Weak transcription Left Ventricle heart
36 chr1:62516800-62524400 Weak transcription Duodenum Mucosa Duodenum
37 chr1:62518200-62531600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr1:62518200-62531800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:62518800-62521600 Weak transcription Fetal Intestine Small intestine
40 chr1:62518800-62531600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:62518800-62532000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:62519000-62521000 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr1:62519000-62523400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr1:62519000-62530600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:62519000-62532000 Weak transcription Fetal Intestine Large intestine
46 chr1:62519000-62541600 Weak transcription HMEC breast
47 chr1:62519000-62550000 Weak transcription Primary T cells from cord blood blood
48 chr1:62519000-62550000 Weak transcription Pancreas Pancrea
49 chr1:62519000-62552000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:62519600-62522200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015