Variant report

Variant rs247779
Chromosome Location chr19:19841590-19841591
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19828400-19843200 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:19831000-19842600 Weak transcription H9 Cell Line embryonic stem cell
3 chr19:19831200-19843000 Weak transcription NH-A brain
4 chr19:19833200-19842600 Weak transcription HSMM muscle
5 chr19:19833400-19842400 Weak transcription Stomach Smooth Muscle stomach
6 chr19:19836400-19842600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:19836600-19842800 Weak transcription Osteobl bone
8 chr19:19836800-19841800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
9 chr19:19836800-19842400 ZNF genes & repeats Fetal Muscle Leg muscle
10 chr19:19837000-19841800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr19:19837000-19842400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr19:19837000-19842600 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
13 chr19:19837200-19842800 ZNF genes & repeats Fetal Intestine Small intestine
14 chr19:19837400-19842400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
15 chr19:19837400-19842800 ZNF genes & repeats Fetal Brain Female brain
16 chr19:19837600-19841600 ZNF genes & repeats Primary T cells fromperipheralblood blood
17 chr19:19837600-19842200 ZNF genes & repeats Dnd41 blood
18 chr19:19837600-19842400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:19837600-19842400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
20 chr19:19837600-19842400 ZNF genes & repeats Fetal Muscle Trunk muscle
21 chr19:19837600-19842600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
22 chr19:19837800-19842200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
23 chr19:19837800-19842200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
24 chr19:19837800-19842800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr19:19838000-19842200 ZNF genes & repeats Primary T cells from cord blood blood
26 chr19:19838000-19842800 ZNF genes & repeats Brain Germinal Matrix brain
27 chr19:19838200-19842400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr19:19838400-19842600 Weak transcription Pancreas Pancrea
29 chr19:19838600-19842400 ZNF genes & repeats Fetal Intestine Large intestine
30 chr19:19838600-19842600 Weak transcription Right Ventricle heart
31 chr19:19838600-19842800 Weak transcription Muscle Satellite Cultured Cells --
32 chr19:19838800-19842600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr19:19838800-19842800 Weak transcription Psoas Muscle Psoas
34 chr19:19838800-19842800 Weak transcription K562 blood
35 chr19:19839000-19842600 ZNF genes & repeats Fetal Stomach stomach
36 chr19:19839600-19841800 ZNF genes & repeats Placenta Placenta
37 chr19:19839600-19842200 ZNF genes & repeats Primary B cells from cord blood blood
38 chr19:19839600-19842600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr19:19839600-19842600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
40 chr19:19839600-19842800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
41 chr19:19839800-19841800 Weak transcription Primary B cells from peripheral blood blood
42 chr19:19839800-19842200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
43 chr19:19839800-19842200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr19:19839800-19842400 ZNF genes & repeats Primary hematopoietic stem cells blood
45 chr19:19839800-19842600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
46 chr19:19839800-19842800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr19:19840000-19841800 ZNF genes & repeats Brain Substantia Nigra brain
48 chr19:19840000-19842200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr19:19840000-19842400 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr19:19840000-19842600 ZNF genes & repeats Fetal Lung lung

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