The 2.0 version of rSNPBase

Variant report

Variant rs2482926
Chromosome Location chr20:25321313-25321314
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25292000-25325200 Weak transcription Primary hematopoietic stem cells blood
2 chr20:25292000-25327400 Weak transcription Aorta Aorta
3 chr20:25292400-25325200 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr20:25292600-25351600 Weak transcription NHDF-Ad bronchial
5 chr20:25302800-25324400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr20:25304000-25324800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr20:25304400-25324200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr20:25304400-25327000 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr20:25304800-25322800 Weak transcription Stomach Smooth Muscle stomach
10 chr20:25305000-25327000 Weak transcription Primary T cells from cord blood blood
11 chr20:25305000-25331800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr20:25305400-25335000 Weak transcription Primary B cells from cord blood blood
13 chr20:25306200-25335800 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr20:25306400-25321600 Weak transcription Right Atrium heart
15 chr20:25309400-25325600 Weak transcription HSMM muscle
16 chr20:25309600-25321800 Weak transcription Left Ventricle heart
17 chr20:25309600-25333200 Weak transcription NHLF lung
18 chr20:25309800-25323200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr20:25309800-25325000 Weak transcription Brain Angular Gyrus brain
20 chr20:25309800-25325400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr20:25310000-25322400 Weak transcription Adipose Nuclei Adipose
22 chr20:25310200-25322000 Weak transcription Brain Anterior Caudate brain
23 chr20:25310200-25332000 Weak transcription Colon Smooth Muscle Colon
24 chr20:25310400-25334400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr20:25310600-25322200 Weak transcription Brain Germinal Matrix brain
26 chr20:25310600-25334200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr20:25311400-25321800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr20:25311400-25327000 Weak transcription Primary T cells fromperipheralblood blood
29 chr20:25315200-25321400 Weak transcription Fetal Muscle Leg muscle
30 chr20:25316800-25326600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr20:25317000-25327600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr20:25317600-25321800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr20:25317600-25321800 Weak transcription Esophagus oesophagus
34 chr20:25317600-25322400 Weak transcription HMEC breast
35 chr20:25317600-25323800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr20:25317600-25335600 Weak transcription Small Intestine intestine
37 chr20:25317800-25326400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr20:25318000-25321400 Enhancers Stomach Mucosa stomach
39 chr20:25318200-25321600 Weak transcription Brain Substantia Nigra brain
40 chr20:25318200-25324200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr20:25318200-25325800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr20:25318400-25324200 Enhancers Fetal Intestine Large intestine
43 chr20:25319000-25321800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr20:25319000-25322400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr20:25319200-25321400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr20:25319200-25321400 Weak transcription Fetal Thymus thymus
47 chr20:25319200-25321400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr20:25319200-25322000 Weak transcription Brain Cingulate Gyrus brain
49 chr20:25319200-25323400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr20:25319200-25323600 Weak transcription Lung lung

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Last update: Aug 31, 2015