Variant report

Variant	rs2484670
Chromosome Location	chr10:44206933-44206934
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs2244131	0.83[CEU][hapmap];0.86[JPT][hapmap]
rs2484669	0.82[CEU][hapmap];0.83[CHB][hapmap];0.84[JPT][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2484674	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2505647	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2505649	0.95[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2505650	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2505651	0.83[ASN][1000 genomes]
rs3120273	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3317585	chr10:44202846-44207644	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44203400-44207200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44204200-44207000	Weak transcription	Spleen	Spleen

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dbSNP/dbVar ID: rs12345 /nsv7879
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