Variant report

Variant	rs2484674
Chromosome Location	chr10:44200232-44200233
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs2244131	0.95[CEU][hapmap];0.84[CHB][hapmap];0.84[JPT][hapmap]
rs2484663	0.81[AMR][1000 genomes]
rs2484669	0.95[CEU][hapmap];0.91[CHB][hapmap];0.92[JPT][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2484670	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2505647	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2505649	0.82[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2505650	0.88[ASN][1000 genomes]
rs2505651	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44195800-44203200	Weak transcription	Ovary	ovary
2	chr10:44196000-44203800	Weak transcription	Right Atrium	heart
3	chr10:44198600-44203000	Weak transcription	Pancreas	Pancrea
4	chr10:44198800-44200400	Enhancers	Left Ventricle	heart
5	chr10:44198800-44203000	Weak transcription	Right Ventricle	heart
6	chr10:44198800-44203200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr10:44199200-44202600	Weak transcription	Adipose Nuclei	Adipose
8	chr10:44199800-44201600	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr10:44200000-44201600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr10:44200000-44201600	Weak transcription	Spleen	Spleen

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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