Variant report

Variant	rs2486329
Chromosome Location	chr9:136859528-136859529
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUND	chr9:136859524-136859816	K562	blood:	n/a	chr9:136859658-136859667
2	CTCF	chr9:136859464-136859888	ECC-1	luminal epithelium:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
3	ZBTB7A	chr9:136859435-136859995	ECC-1	luminal epithelium:	n/a	n/a
4	YY1	chr9:136859466-136859784	K562	blood:	n/a	n/a
5	RAD21	chr9:136859283-136860589	MCF-7	breast:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
6	NRF1	chr9:136859524-136859737	GM12878	blood:	n/a	n/a
7	RUNX3	chr9:136859471-136859925	GM12878	blood:	n/a	n/a
8	RAD21	chr9:136859174-136859910	H1-hESC	embryonic stem cell:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572 chr9:136859197-136859210
9	MAX	chr9:136859441-136859868	H1-hESC	embryonic stem cell:	n/a	n/a
10	CTCF	chr9:136859505-136859858	K562	blood:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
11	CHD1	chr9:136859440-136860013	IMR90	lung:	n/a	n/a
12	CTCF	chr9:136859335-136860779	A549	lung:	n/a	chr9:136860728-136860746 chr9:136859681-136859702 chr9:136859686-136859704 chr9:136860260-136860278 chr9:136860299-136860317 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136860730-136860743 chr9:136859692-136859701 chr9:136860263-136860272 chr9:136860265-136860275 chr9:136859687-136859703 chr9:136859689-136859699
13	RAD21	chr9:136859504-136859862	K562	blood:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
14	POLR2A	chr9:136859274-136859776	HUVEC	blood vessel:	n/a	n/a
15	FOXM1	chr9:136859437-136859875	GM12878	blood:	n/a	n/a
16	CTCF	chr9:136859475-136860457	K562	blood:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136860260-136860278 chr9:136860299-136860317 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136860263-136860272 chr9:136860265-136860275 chr9:136859687-136859703 chr9:136859689-136859699
17	ZKSCAN1	chr9:136859528-136859815	Hela-S3	cervix:	n/a	n/a
18	RAD21	chr9:136859316-136859982	H1-hESC	embryonic stem cell:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
19	MAX	chr9:136859527-136859821	K562	blood:	n/a	n/a
20	POLR2A	chr9:136859427-136859913	HepG2	liver:	n/a	n/a
21	ZNF143	chr9:136859473-136859856	Hela-S3	cervix:	n/a	n/a
22	RFX5	chr9:136859506-136859862	Hela-S3	cervix:	n/a	n/a
23	MAZ	chr9:136859513-136859819	HepG2	liver:	n/a	n/a
24	TCF3	chr9:136859457-136859810	GM12878	blood:	n/a	n/a
25	MAX	chr9:136859485-136859872	NB4	blood:	n/a	n/a
26	RAD21	chr9:136859428-136859936	H1-hESC	embryonic stem cell:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
27	RAD21	chr9:136859316-136859990	MCF-7	breast:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
28	BHLHE40	chr9:136859506-136859800	K562	blood:	n/a	n/a
29	MAZ	chr9:136859473-136859883	Hela-S3	cervix:	n/a	n/a
30	CTCF	chr9:136859482-136859933	HepG2	liver:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
31	POLR2A	chr9:136859502-136859742	GM12878	blood:	n/a	n/a
32	RAD21	chr9:136859356-136860439	Hela-S3	cervix:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
33	BRCA1	chr9:136859495-136859859	Hela-S3	cervix:	n/a	n/a
34	RFX5	chr9:136859322-136859806	GM12878	blood:	n/a	n/a
35	CTCF	chr9:136859500-136859876	T-47D	breast:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
36	POLR2A	chr9:136859180-136859957	MCF10A-Er-Src	breast:	n/a	n/a
37	ZBTB7A	chr9:136859471-136859820	K562	blood:	n/a	n/a
38	CTCF	chr9:136859004-136860729	MCF-7	breast:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136860260-136860278 chr9:136860299-136860317 chr9:136859688-136859701 chr9:136859119-136859132 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136860263-136860272 chr9:136860265-136860275 chr9:136859687-136859703 chr9:136859689-136859699
39	RAD21	chr9:136859259-136860561	IMR90	lung:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
40	CTCF	chr9:136859520-136860019	K562	blood:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
41	CTCF	chr9:136859483-136859850	A549	lung:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
42	CTCF	chr9:136859447-136859886	T-47D	breast:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
43	CTCF	chr9:136859514-136859888	GM12891	blood:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
44	RAD21	chr9:136859422-136859952	GM12878	blood:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
45	CHD2	chr9:136859515-136859800	Hela-S3	cervix:	n/a	n/a
46	CTCF	chr9:136859378-136860535	MCF-7	breast:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136860260-136860278 chr9:136860299-136860317 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136860263-136860272 chr9:136860265-136860275 chr9:136859687-136859703 chr9:136859689-136859699
47	CTCF	chr9:136859395-136860694	HCT-116	colon:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136860260-136860278 chr9:136860299-136860317 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136860263-136860272 chr9:136860265-136860275 chr9:136859687-136859703 chr9:136859689-136859699
48	CTCF	chr9:136859427-136859854	A549	lung:	n/a	chr9:136859681-136859702 chr9:136859686-136859704 chr9:136859688-136859701 chr9:136859559-136859568 chr9:136859692-136859701 chr9:136859687-136859703 chr9:136859689-136859699
49	RAD21	chr9:136859489-136860445	A549	lung:	n/a	chr9:136859688-136859698 chr9:136859684-136859703 chr9:136859687-136859700 chr9:136859686-136859698 chr9:136859708-136859721 chr9:136859559-136859572
50	SIN3A	chr9:136859526-136859862	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:136859325..136860777-chr9:136964002..136965283,7	MCF-7	breast:
2	chr9:136655644..136657543-chr9:136859054..136861724,2	K562	blood:
3	chr9:136607693..136608878-chr9:136859235..136860612,8	MCF-7	breast:
4	chr9:136657412..136658751-chr9:136858523..136860164,12	K562	blood:
5	chr9:136657819..136658763-chr9:136858806..136859951,5	MCF-7	breast:
6	chr9:136594711..136597550-chr9:136858767..136860355,2	MCF-7	breast:
7	chr9:136747429..136748291-chr9:136859497..136860075,2	MCF-7	breast:
8	chr9:136647007..136648956-chr9:136858795..136860235,12	MCF-7	breast:
9	chr9:136657461..136661655-chr9:136857893..136859866,4	K562	blood:
10	chr9:136600335..136600989-chr9:136859268..136860138,2	MCF-7	breast:
11	chr9:136855194..136860597-chr9:136929703..136933650,7	MCF-7	breast:
12	chr9:136600362..136604558-chr9:136857405..136860234,5	MCF-7	breast:
13	chr9:136657511..136659120-chr9:136859180..136860603,16	MCF-7	breast:
14	chr9:136655962..136656512-chr9:136858875..136859685,2	K562	blood:
15	chr9:136859431..136860674-chr9:136964030..136964900,5	MCF-7	breast:
16	chr9:136857193..136859735-chr9:136888278..136891342,4	MCF-7	breast:
17	chr9:136819042..136820561-chr9:136859120..136860817,2	MCF-7	breast:
18	chr9:136646919..136648935-chr9:136858713..136860466,10	MCF-7	breast:
19	chr9:136625089..136627399-chr9:136858004..136860328,2	MCF-7	breast:
20	chr9:136858694..136861040-chr9:136863202..136865256,2	MCF-7	breast:
21	chr9:136858439..136860470-chr9:136963479..136965806,2	MCF-7	breast:
22	chr9:136591900..136594207-chr9:136858637..136860236,2	MCF-7	breast:
23	chr9:136856335..136860882-chr9:136888369..136892368,8	MCF-7	breast:
24	chr17:58677435..58680394-chr9:136857896..136860386,2	MCF-7	breast:
25	chr9:136592463..136593107-chr9:136859236..136860141,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDR5-7	chr9:136857728-136861324	NONHSAT135347

Variant related genes	Relation type
VAV2	TF binding region
ENSG00000235106	Chromatin interaction
ENSG00000169925	Chromatin interaction
ENSG00000170836	Chromatin interaction
ENSG00000123453	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs2519141	0.96[AFR][1000 genomes]
rs2810474	0.86[AFR][1000 genomes]
rs2810475	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894124	chr9:136716399-136870787	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv894125	chr9:136723520-136931957	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv894128	chr9:136753246-136906752	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	nsv1046310	chr9:136762829-136872226	Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
5	nsv894130	chr9:136767346-136906752	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
6	nsv831748	chr9:136788484-136944326	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
7	nsv894131	chr9:136792765-136906752	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
8	nsv831749	chr9:136809200-136915764	Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
9	nsv894132	chr9:136813341-136950691	Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
10	nsv428226	chr9:136825035-136994606	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
11	nsv615743	chr9:136835343-136874158	Enhancers Bivalent Enhancer Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
12	nsv894133	chr9:136839840-136887757	Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
13	nsv894134	chr9:136839840-136892523	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
14	nsv894135	chr9:136839840-136927657	Strong transcription Enhancers Genic enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
15	nsv894136	chr9:136839840-136938961	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
16	nsv894137	chr9:136839840-136950691	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
17	nsv894138	chr9:136839840-137093168	Strong transcription Genic enhancers Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
18	nsv615744	chr9:136843974-136865879	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
19	nsv615745	chr9:136844973-136876021	Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
20	nsv825148	chr9:136848471-137025632	Flanking Bivalent TSS/Enh Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
21	nsv615746	chr9:136848821-136881323	Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
22	esv1799134	chr9:136850906-136863033	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
23	esv1823529	chr9:136850906-136863033	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
24	esv1834445	chr9:136850906-136863033	Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
25	nsv615747	chr9:136852501-136877628	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
26	nsv615756	chr9:136856591-136859913	Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
27	esv1840870	chr9:136856591-136865879	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
28	esv1841228	chr9:136856591-136865879	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
29	esv1839642	chr9:136856591-136877902	Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
30	esv1842103	chr9:136856591-136878235	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
31	esv1797477	chr9:136856591-136879116	Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
32	esv1838443	chr9:136856630-136862410	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
33	nsv615763	chr9:136856694-136859913	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
34	nsv615769	chr9:136856808-136859913	Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
35	esv1839298	chr9:136856808-136865879	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:136858000-136859600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
2	chr9:136858200-136859600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
3	chr9:136858400-136859600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr9:136858400-136859600	Flanking Active TSS	Hela-S3	cervix
5	chr9:136858400-136859800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr9:136858400-136860400	Enhancers	Fetal Brain Male	brain
7	chr9:136858600-136859600	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr9:136858600-136859600	Enhancers	Lung	lung
9	chr9:136858600-136859600	Enhancers	Sigmoid Colon	Sigmoid Colon
10	chr9:136858600-136859600	Enhancers	Spleen	Spleen
11	chr9:136858600-136860000	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr9:136858600-136860200	Enhancers	Primary B cells from cord blood	blood
13	chr9:136858800-136859600	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr9:136858800-136859600	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr9:136858800-136859600	Enhancers	Primary hematopoietic stem cells	blood
16	chr9:136858800-136859600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr9:136858800-136859600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr9:136858800-136859600	Enhancers	Primary T killer memory cells from peripheral blood	blood
19	chr9:136858800-136859600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
20	chr9:136858800-136859600	Enhancers	Brain Anterior Caudate	brain
21	chr9:136858800-136859600	Enhancers	Brain Inferior Temporal Lobe	brain
22	chr9:136858800-136859600	Enhancers	Fetal Lung	lung
23	chr9:136858800-136859600	Bivalent Enhancer	Fetal Thymus	thymus
24	chr9:136858800-136859600	Enhancers	Left Ventricle	heart
25	chr9:136858800-136859600	Enhancers	Ovary	ovary
26	chr9:136858800-136859600	Flanking Active TSS	HepG2	liver
27	chr9:136858800-136859800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr9:136858800-136859800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
29	chr9:136858800-136859800	Enhancers	Brain Hippocampus Middle	brain
30	chr9:136858800-136859800	Bivalent Enhancer	Placenta	Placenta
31	chr9:136858800-136859800	Enhancers	Pancreas	Pancrea
32	chr9:136858800-136860000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr9:136858800-136860000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr9:136858800-136860000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr9:136858800-136860000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
36	chr9:136858800-136860000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
37	chr9:136858800-136860000	Enhancers	Rectal Mucosa Donor 29	rectum
38	chr9:136858800-136860000	Enhancers	Stomach Mucosa	stomach
39	chr9:136858800-136860400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr9:136858800-136860400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
41	chr9:136858800-136860600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr9:136858800-136861000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr9:136858800-136861600	Weak transcription	Pancreatic Islets	Pancreatic Islet
44	chr9:136859000-136859600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr9:136859000-136859600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr9:136859000-136859600	Enhancers	HUES6 Cell Line	embryonic stem cell
47	chr9:136859000-136859600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr9:136859000-136859600	Enhancers	Liver	Liver
49	chr9:136859000-136859600	Enhancers	Colonic Mucosa	Colon
50	chr9:136859000-136859600	Enhancers	Esophagus	oesophagus

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