The 2.0 version of rSNPBase

Variant report

Variant rs2505505
Chromosome Location chr10:43648221-43648222
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43634800-43652200 Weak transcription Gastric stomach
2 chr10:43635400-43655600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr10:43635600-43689000 Weak transcription Esophagus oesophagus
4 chr10:43636600-43654800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr10:43636600-43655600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr10:43637400-43655200 Weak transcription HSMM muscle
7 chr10:43637600-43651200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr10:43637600-43652200 Weak transcription Fetal Thymus thymus
9 chr10:43638600-43649000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr10:43639400-43650600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr10:43641400-43657400 Weak transcription A549 lung
12 chr10:43644800-43652200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr10:43645000-43650800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr10:43645600-43651600 Enhancers Primary T helper cells fromperipheralblood blood
15 chr10:43645600-43656800 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr10:43646600-43658400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr10:43646800-43648400 Enhancers Fetal Lung lung
18 chr10:43647000-43652200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr10:43647000-43655600 Weak transcription Primary B cells from peripheral blood blood
20 chr10:43647200-43648400 Weak transcription Aorta Aorta
21 chr10:43647200-43650600 Weak transcription Small Intestine intestine
22 chr10:43647200-43651000 Weak transcription Primary hematopoietic stem cells blood
23 chr10:43647200-43652000 Weak transcription Pancreas Pancrea
24 chr10:43647200-43652200 Weak transcription Ovary ovary
25 chr10:43647200-43652200 Weak transcription Thymus Thymus
26 chr10:43647200-43656200 Weak transcription Spleen Spleen
27 chr10:43647200-43656400 Weak transcription Fetal Muscle Leg muscle
28 chr10:43647200-43667800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr10:43647400-43648400 Enhancers Primary neutrophils fromperipheralblood blood
30 chr10:43647400-43648400 Weak transcription Primary T cells fromperipheralblood blood
31 chr10:43647400-43648400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr10:43647400-43648400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr10:43647400-43648600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr10:43647400-43649600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr10:43647400-43650600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr10:43647400-43650600 Weak transcription Brain Angular Gyrus brain
37 chr10:43647400-43650600 Weak transcription Brain Cingulate Gyrus brain
38 chr10:43647400-43650600 Weak transcription Right Atrium heart
39 chr10:43647400-43650800 Weak transcription Brain Inferior Temporal Lobe brain
40 chr10:43647400-43652000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr10:43647400-43652200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr10:43647400-43652200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr10:43647400-43652400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr10:43647400-43654800 Weak transcription Psoas Muscle Psoas
45 chr10:43647400-43655200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr10:43647400-43655400 Weak transcription Rectal Smooth Muscle rectum
47 chr10:43647400-43655600 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr10:43647400-43656200 Weak transcription Duodenum Mucosa Duodenum
49 chr10:43647400-43656400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr10:43647400-43656800 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015