The 2.0 version of rSNPBase

Variant report

Variant rs2505511
Chromosome Location chr10:43641029-43641030
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43634800-43646800 Weak transcription Left Ventricle heart
2 chr10:43634800-43652200 Weak transcription Gastric stomach
3 chr10:43635000-43641600 Weak transcription Psoas Muscle Psoas
4 chr10:43635200-43641800 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr10:43635400-43641200 Weak transcription Brain Substantia Nigra brain
6 chr10:43635400-43642400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr10:43635400-43644200 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr10:43635400-43655600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr10:43635600-43647000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr10:43635600-43689000 Weak transcription Esophagus oesophagus
11 chr10:43635800-43642000 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr10:43636000-43641800 Enhancers Primary T helper cells fromperipheralblood blood
13 chr10:43636200-43641600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr10:43636400-43647000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr10:43636600-43641400 Weak transcription Brain Germinal Matrix brain
16 chr10:43636600-43641800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr10:43636600-43642200 Enhancers Primary T helper cells PMA-I stimulated --
18 chr10:43636600-43646800 Weak transcription NHLF lung
19 chr10:43636600-43654800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr10:43636600-43655600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr10:43637200-43641400 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr10:43637400-43641600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr10:43637400-43642000 Enhancers Primary neutrophils fromperipheralblood blood
24 chr10:43637400-43647000 Weak transcription HSMMtube muscle
25 chr10:43637400-43655200 Weak transcription HSMM muscle
26 chr10:43637600-43651200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr10:43637600-43652200 Weak transcription Fetal Thymus thymus
28 chr10:43637800-43641200 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr10:43638000-43642000 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr10:43638200-43643800 Weak transcription Primary hematopoietic stem cells blood
31 chr10:43638200-43646800 Weak transcription Thymus Thymus
32 chr10:43638600-43641200 Weak transcription Primary B cells from cord blood blood
33 chr10:43638600-43645800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr10:43638600-43649000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr10:43639000-43641200 Enhancers Primary T cells from cord blood blood
36 chr10:43639000-43642000 Enhancers Monocytes-CD14+_RO01746 blood
37 chr10:43639000-43644400 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr10:43639400-43647000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr10:43639400-43650600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr10:43639600-43641600 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr10:43639600-43647000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr10:43640000-43641600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr10:43640000-43641800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr10:43640400-43641400 Enhancers GM12878-XiMat blood
45 chr10:43640400-43642200 Enhancers Primary T cells fromperipheralblood blood
46 chr10:43640400-43642200 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr10:43640400-43642400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr10:43640400-43643200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr10:43640600-43641600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr10:43640600-43642400 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015