The 2.0 version of rSNPBase

Variant report

Variant rs2435339
Chromosome Location chr10:43642173-43642174
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43634800-43646800 Weak transcription Left Ventricle heart
2 chr10:43634800-43652200 Weak transcription Gastric stomach
3 chr10:43635400-43642400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr10:43635400-43644200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr10:43635400-43655600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr10:43635600-43647000 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr10:43635600-43689000 Weak transcription Esophagus oesophagus
8 chr10:43636400-43647000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr10:43636600-43642200 Enhancers Primary T helper cells PMA-I stimulated --
10 chr10:43636600-43646800 Weak transcription NHLF lung
11 chr10:43636600-43654800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr10:43636600-43655600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr10:43637400-43647000 Weak transcription HSMMtube muscle
14 chr10:43637400-43655200 Weak transcription HSMM muscle
15 chr10:43637600-43651200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr10:43637600-43652200 Weak transcription Fetal Thymus thymus
17 chr10:43638200-43643800 Weak transcription Primary hematopoietic stem cells blood
18 chr10:43638200-43646800 Weak transcription Thymus Thymus
19 chr10:43638600-43645800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr10:43638600-43649000 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr10:43639000-43644400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr10:43639400-43647000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr10:43639400-43650600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr10:43639600-43647000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr10:43640400-43642200 Enhancers Primary T cells fromperipheralblood blood
26 chr10:43640400-43642200 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr10:43640400-43642400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr10:43640400-43643200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr10:43640600-43642400 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr10:43640600-43643000 Weak transcription NHDF-Ad bronchial
31 chr10:43640600-43646200 Weak transcription Muscle Satellite Cultured Cells --
32 chr10:43641000-43644800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr10:43641000-43646400 Weak transcription Osteobl bone
34 chr10:43641200-43643000 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr10:43641200-43646800 Weak transcription Small Intestine intestine
36 chr10:43641400-43657400 Weak transcription A549 lung
37 chr10:43641600-43642200 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr10:43641600-43642200 Enhancers Psoas Muscle Psoas
39 chr10:43641600-43643000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr10:43641600-43647000 Weak transcription Stomach Mucosa stomach
41 chr10:43641800-43642800 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr10:43641800-43646000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr10:43641800-43646800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr10:43642000-43642200 Enhancers Primary monocytes fromperipheralblood blood
45 chr10:43642000-43642200 Enhancers Primary T cells from cord blood blood
46 chr10:43642000-43643000 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr10:43642000-43643200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr10:43642000-43643600 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr10:43642000-43643600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr10:43642000-43645800 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015