Variant report

Variant rs2509948
Chromosome Location chr11:65406393-65406394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65400800-65406600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
2 chr11:65405000-65406400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
3 chr11:65405000-65406400 Enhancers Fetal Brain Male brain
4 chr11:65405000-65406400 Flanking Active TSS Pancreas Pancrea
5 chr11:65405000-65406600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr11:65405000-65406600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
7 chr11:65405000-65406600 Flanking Active TSS Stomach Smooth Muscle stomach
8 chr11:65405200-65406400 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
9 chr11:65405200-65406400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr11:65405200-65406400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr11:65405200-65406600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
12 chr11:65405200-65406600 Flanking Active TSS Liver Liver
13 chr11:65405200-65406600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
14 chr11:65405200-65406600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
15 chr11:65405200-65406600 Active TSS HSMMtube muscle
16 chr11:65405200-65406600 Flanking Active TSS NHEK skin
17 chr11:65405200-65406800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
18 chr11:65405200-65406800 Flanking Active TSS Fetal Muscle Trunk muscle
19 chr11:65405200-65409600 Flanking Active TSS Primary B cells from cord blood blood
20 chr11:65405200-65409600 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr11:65405400-65406400 Active TSS Fetal Kidney kidney
22 chr11:65405400-65406400 Flanking Active TSS HMEC breast
23 chr11:65405400-65406600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr11:65405400-65406600 Active TSS Right Atrium heart
25 chr11:65405400-65406600 Active TSS Small Intestine intestine
26 chr11:65405400-65406600 Flanking Active TSS Dnd41 blood
27 chr11:65405400-65407000 Active TSS Rectal Smooth Muscle rectum
28 chr11:65405400-65407200 Active TSS Colon Smooth Muscle Colon
29 chr11:65405600-65406400 Active TSS ES-WA7 Cell Line embryonic stem cell
30 chr11:65405600-65406400 Active TSS H9 Cell Line embryonic stem cell
31 chr11:65405600-65406400 Flanking Active TSS Stomach Mucosa stomach
32 chr11:65405600-65406600 Flanking Active TSS Placenta Placenta
33 chr11:65405600-65406600 Active TSS Sigmoid Colon Sigmoid Colon
34 chr11:65405600-65406600 Flanking Active TSS HUVEC blood vessel
35 chr11:65405600-65407800 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
36 chr11:65405800-65406400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr11:65405800-65406400 Flanking Active TSS Muscle Satellite Cultured Cells --
38 chr11:65405800-65406400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
39 chr11:65405800-65406400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr11:65405800-65406400 Flanking Active TSS Fetal Intestine Large intestine
41 chr11:65405800-65406400 Flanking Active TSS Osteobl bone
42 chr11:65405800-65406600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
43 chr11:65405800-65406600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:65405800-65406600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
45 chr11:65405800-65406600 Flanking Active TSS Adipose Nuclei Adipose
46 chr11:65405800-65406600 Flanking Active TSS Brain Angular Gyrus brain
47 chr11:65405800-65406600 Flanking Active TSS Brain Germinal Matrix brain
48 chr11:65405800-65406600 Flanking Active TSS Brain Inferior Temporal Lobe brain
49 chr11:65405800-65406600 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
50 chr11:65405800-65406600 Flanking Active TSS Fetal Lung lung

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