Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1283663	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1283664	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1283675	0.80[EUR][1000 genomes]
rs1283676	0.81[EUR][1000 genomes]
rs1283678	0.82[EUR][1000 genomes]
rs1283679	0.82[EUR][1000 genomes]
rs1283680	0.82[EUR][1000 genomes]
rs1283685	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1283692	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1283694	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1283695	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1283702	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1298936	0.82[EUR][1000 genomes]
rs1433182	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1654729	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1654750	0.82[EUR][1000 genomes]
rs1654751	0.82[EUR][1000 genomes]
rs1672165	0.82[EUR][1000 genomes]
rs1672166	0.82[EUR][1000 genomes]
rs2916083	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764100	chr8:108220671-108469233	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1030831	chr8:108224295-108466437	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv539714	chr8:108224295-108466437	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv465760	chr8:108224687-108485912	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv611851	chr8:108224687-108485912	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108389800-108401200	Weak transcription	Fetal Kidney	kidney
2	chr8:108393800-108397800	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr8:108393800-108397800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr8:108393800-108398200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:108394000-108401400	Weak transcription	Ovary	ovary
6	chr8:108395800-108399600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:108396000-108399400	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr8:108396200-108397400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:108396200-108414000	Weak transcription	Osteobl	bone
10	chr8:108396800-108398000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
11	chr8:108397000-108397400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
12	chr8:108397000-108397600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:108397000-108397600	ZNF genes & repeats	Fetal Lung	lung
14	chr8:108397000-108398000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
15	chr8:108397200-108397400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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