Variant report

Variant	rs2523508
Chromosome Location	chr6:31508761-31508762
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:65)
CpG islands
(count:0)
Chromatin interactive
region (count:43)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:65 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:31508687-31511132	K562	blood:	n/a	n/a
2	POLR2A	chr6:31508592-31510388	K562	blood:	n/a	n/a
3	FOXM1	chr6:31508540-31510464	GM12878	blood:	n/a	n/a
4	POLR2A	chr6:31508618-31511594	HepG2	liver:	n/a	n/a
5	MTA3	chr6:31508398-31510639	GM12878	blood:	n/a	n/a
6	YY1	chr6:31508752-31509144	K562	blood:	n/a	n/a
7	POLR2A	chr6:31508724-31510477	HepG2	liver:	n/a	n/a
8	TAL1	chr6:31508755-31510450	K562	blood:	n/a	n/a
9	SIN3AK20	chr6:31508753-31509192	PFSK-1	brain:	n/a	n/a
10	RUNX3	chr6:31508757-31510430	GM12878	blood:	n/a	n/a
11	YY1	chr6:31508731-31510020	H1-hESC	embryonic stem cell:	n/a	chr6:31509513-31509530
12	CBX3	chr6:31508733-31510850	K562	blood:	n/a	n/a
13	YY1	chr6:31508729-31509994	K562	blood:	n/a	chr6:31509513-31509530
14	POLR2A	chr6:31508751-31510540	GM12891	blood:	n/a	n/a
15	YY1	chr6:31508760-31510464	SK-N-SH_RA	brain:	n/a	chr6:31509513-31509530
16	YY1	chr6:31508715-31510300	SK-N-SH_RA	brain:	n/a	chr6:31509513-31509530
17	REST	chr6:31508480-31510689	H1-neurons	neurons:	n/a	chr6:31510328-31510337 chr6:31510323-31510343
18	POLR2A	chr6:31508710-31510577	GM12892	blood:	n/a	n/a
19	NFIC	chr6:31508736-31510436	GM12878	blood:	n/a	n/a
20	NR2F2	chr6:31508474-31511071	K562	blood:	n/a	n/a
21	POLR2A	chr6:31508667-31510803	PANC-1	pancreas:	n/a	n/a
22	YY1	chr6:31508730-31510514	SK-N-SH	brain:	n/a	chr6:31509513-31509530
23	MBD4	chr6:31508724-31510478	HepG2	liver:	n/a	n/a
24	CUX1	chr6:31508725-31510380	GM12878	blood:	n/a	n/a
25	WRNIP1	chr6:31507662-31510318	GM12878	blood:	n/a	n/a
26	MXI1	chr6:31508653-31510652	IMR90	lung:	n/a	n/a
27	POLR2A	chr6:31508559-31510731	Hela-S3	cervix:	n/a	n/a
28	SIN3A	chr6:31508635-31510536	H1-hESC	embryonic stem cell:	n/a	n/a
29	POLR2A	chr6:31508710-31510490	SK-N-SH	brain:	n/a	n/a
30	SIN3AK20	chr6:31508670-31510558	MCF-7	breast:	n/a	n/a
31	RELA	chr6:31508731-31510406	GM12878	blood:	n/a	n/a
32	CHD1	chr6:31508528-31510443	H1-hESC	embryonic stem cell:	n/a	n/a
33	POLR2A	chr6:31508749-31510965	K562	blood:	n/a	n/a
34	MAX	chr6:31508725-31510597	HepG2	liver:	n/a	n/a
35	YY1	chr6:31508749-31510301	A549	lung:	n/a	chr6:31509513-31509530
36	POLR2A	chr6:31505819-31511508	SK-N-MC	brain:	n/a	n/a
37	YY1	chr6:31508716-31510564	H1-hESC	embryonic stem cell:	n/a	chr6:31509513-31509530
38	KAP1	chr6:31508742-31510647	HEK293	kidney:	n/a	n/a
39	HCFC1	chr6:31508564-31511015	Hela-S3	cervix:	n/a	n/a
40	POLR2A	chr6:31508623-31510431	HepG2	liver:	n/a	n/a
41	ATF2	chr6:31508715-31509204	GM12878	blood:	n/a	n/a
42	MXI1	chr6:31507514-31511487	SK-N-SH	brain:	n/a	n/a
43	POLR2A	chr6:31508485-31510595	HUVEC	blood vessel:	n/a	n/a
44	POLR2A	chr6:31508646-31510595	GM12892	blood:	n/a	n/a
45	TEAD4	chr6:31508643-31510604	K562	blood:	n/a	chr6:31510445-31510454
46	ZNF263	chr6:31508710-31510524	HEK293-T-REx	kidney:	n/a	chr6:31510229-31510238
47	REST	chr6:31508732-31510584	HL-60	blood:	n/a	chr6:31510328-31510337 chr6:31510323-31510343
48	BCLAF1	chr6:31508759-31510354	GM12878	blood:	n/a	chr6:31510328-31510337
49	PML	chr6:31508597-31510639	GM12878	blood:	n/a	n/a
50	POLR2A	chr6:31508659-31510653	GM12878	blood:	n/a	n/a

No data

(count:43 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31508088..31512302-chr6:31792582..31797881,5	K562	blood:
2	chr6:31508602..31511012-chr6:31803135..31806104,3	K562	blood:
3	chr6:31507549..31510479-chr6:31669713..31671247,2	MCF-7	breast:
4	chr6:31508752..31512657-chr6:31701865..31705930,6	K562	blood:
5	chr6:31507082..31511713-chr6:31583957..31591905,17	MCF-7	breast:
6	chr6:31506561..31512642-chr6:31697539..31702106,5	K562	blood:
7	chr6:31507867..31510784-chr6:31781026..31784406,3	MCF-7	breast:
8	chr6:31507451..31516055-chr6:31617949..31624791,11	MCF-7	breast:
9	chr6:31508352..31511076-chr6:31794765..31796870,2	MCF-7	breast:
10	chr6:31506496..31512275-chr6:31630248..31634828,11	K562	blood:
11	chr6:31459710..31467567-chr6:31506191..31511027,18	MCF-7	breast:
12	chr6:31368721..31370487-chr6:31508420..31510652,2	K562	blood:
13	chr6:31508667..31511581-chr6:31742885..31745171,3	MCF-7	breast:
14	chr6:31508285..31510798-chr6:31940056..31942252,2	K562	blood:
15	chr6:31508080..31511338-chr6:31773122..31775825,3	K562	blood:
16	chr6:31506740..31512488-chr6:31586502..31592966,30	K562	blood:
17	chr6:31508345..31511059-chr6:31794031..31797026,5	K562	blood:
18	chr6:31508732..31511014-chr6:31781931..31784408,2	K562	blood:
19	chr6:31507082..31510843-chr6:31599707..31603450,4	K562	blood:
20	chr6:31506595..31512441-chr6:31585525..31590767,30	K562	blood:
21	chr6:31508417..31511292-chr6:31625631..31629953,4	K562	blood:
22	chr6:31508578..31511041-chr6:31743489..31745514,2	K562	blood:
23	chr6:31506529..31508833-chr6:31606767..31610616,4	K562	blood:
24	chr6:31465292..31466331-chr6:31508544..31510586,5	MCF-7	breast:
25	chr6:31507205..31511686-chr6:31618024..31622039,13	K562	blood:
26	chr6:31458384..31468965-chr6:31503613..31512721,28	K562	blood:
27	chr6:31506998..31509094-chr6:31864561..31866443,2	MCF-7	breast:
28	chr6:31507998..31511841-chr6:31541735..31545245,5	MCF-7	breast:
29	chr6:31508169..31513281-chr6:31547465..31550370,6	K562	blood:
30	chr6:31507710..31510101-chr6:31604073..31606097,3	K562	blood:
31	chr6:31508286..31510817-chr6:31550087..31552108,2	K562	blood:
32	chr6:31507406..31516955-chr6:31615847..31623354,26	K562	blood:
33	chr6:31507927..31511187-chr6:31633283..31638231,4	MCF-7	breast:
34	chr6:31505350..31512312-chr6:31630543..31635379,11	K562	blood:
35	chr6:31506029..31511048-chr6:31626239..31630287,7	MCF-7	breast:
36	chr6:31507058..31511692-chr6:31586700..31590601,11	MCF-7	breast:
37	chr6:31462628..31467072-chr6:31508179..31511597,8	MCF-7	breast:
38	chr6:31368987..31371166-chr6:31508549..31510652,2	K562	blood:
39	chr6:31508700..31511164-chr6:32162690..32164850,2	K562	blood:
40	chr6:31460486..31468205-chr6:31503942..31512721,23	K562	blood:
41	chr6:31504619..31510971-chr6:31539361..31543067,6	K562	blood:
42	chr6:31508386..31510621-chr6:32096687..32099353,2	K562	blood:
43	chr6:31507944..31511146-chr6:31743964..31746169,3	K562	blood:

No data

Variant related genes	Relation type
SNORD117	TF binding region
DDX39B	TF binding region
DDX39B-AS1	TF binding region
ENSG00000213722	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000199332	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000200816	Chromatin interaction
ENSG00000204427	Chromatin interaction
ENSG00000204301	Chromatin interaction
ENSG00000263020	Chromatin interaction
ENSG00000204390	Chromatin interaction
ENSG00000204516	Chromatin interaction
ENSG00000240053	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000201754	Chromatin interaction
ENSG00000227507	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000201207	Chromatin interaction
ENSG00000204392	Chromatin interaction
ENSG00000204389	Chromatin interaction
ENSG00000213654	Chromatin interaction
ENSG00000204387	Chromatin interaction
ENSG00000232810	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000201680	Chromatin interaction
ENSG00000204444	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000204439	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000226979	Chromatin interaction
ENSG00000204315	Chromatin interaction
ENSG00000227198	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000204394	Chromatin interaction

Extended variants
information (count: 57 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs1129640	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2516393	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2516394	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2523502	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2523510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2523511	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093948	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093950	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093976	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093977	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3093978	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093979	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093980	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093981	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093982	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093983	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093984	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093985	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093986	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093990	0.88[AFR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3093995	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3094001	0.84[EUR][1000 genomes]
rs3095235	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3115536	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3115537	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3130051	0.81[EUR][1000 genomes]
rs3130054	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3130056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3130057	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3130058	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3130640	0.84[EUR][1000 genomes]
rs3131628	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3131629	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3131630	0.90[ASN][1000 genomes]
rs3131633	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3132458	0.83[EUR][1000 genomes]
rs3132461	0.83[EUR][1000 genomes]
rs9267485	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
2	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
3	esv2759414	chr6:31028290-31542308	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	151 gene(s)	inside rSNPs	diseases
4	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
5	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
6	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
7	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
8	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
9	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
10	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
11	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
12	nsv1018463	chr6:31337336-31525275	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	104 gene(s)	inside rSNPs	diseases
13	nsv538189	chr6:31337336-31525275	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	104 gene(s)	inside rSNPs	diseases
14	nsv432868	chr6:31338844-31721033	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	250 gene(s)	inside rSNPs	diseases
15	esv2757162	chr6:31353329-31542308	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	99 gene(s)	inside rSNPs	diseases
16	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
17	nsv432877	chr6:31412961-31528690	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	88 gene(s)	inside rSNPs	diseases
18	nsv830627	chr6:31496214-31659950	Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
19	nsv470809	chr6:31496915-31544189	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	76 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs2523508	HIST1H1B	cis	cerebellum	SCAN
rs2523508	HCG22	cis	lymphoblastoid	seeQTL
rs2523508	HLA-C	cis	lymphoblastoid	GTEx
rs2523508	HLA-DRB5	cis	cerebellum	SCAN
rs2523508	HLA-DRB5	cis	lymphoblastoid	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31505600-31508800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:31506200-31508800	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:31506200-31509400	Transcr. at gene 5' and 3'	Dnd41	blood
4	chr6:31506400-31509000	Transcr. at gene 5' and 3'	Muscle Satellite Cultured Cells	--
5	chr6:31506400-31509000	Transcr. at gene 5' and 3'	NHEK	skin
6	chr6:31506600-31508800	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:31506600-31509000	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
8	chr6:31506600-31510400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
9	chr6:31506800-31509000	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
10	chr6:31506800-31509000	Transcr. at gene 5' and 3'	A549	lung
11	chr6:31506800-31509200	Transcr. at gene 5' and 3'	K562	blood
12	chr6:31506800-31509400	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
13	chr6:31507000-31509000	Transcr. at gene 5' and 3'	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr6:31507200-31508800	Transcr. at gene 5' and 3'	Stomach Smooth Muscle	stomach
15	chr6:31507200-31509000	Transcr. at gene 5' and 3'	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr6:31507200-31509000	Transcr. at gene 5' and 3'	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr6:31507200-31509000	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
18	chr6:31507200-31509000	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
19	chr6:31507600-31508800	Transcr. at gene 5' and 3'	ES-I3 Cell Line	embryonic stem cell
20	chr6:31507600-31510800	Active TSS	Pancreatic Islets	Pancreatic Islet
21	chr6:31507800-31508800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
22	chr6:31507800-31508800	Transcr. at gene 5' and 3'	Fetal Muscle Leg	muscle
23	chr6:31507800-31509200	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
24	chr6:31507800-31510600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr6:31508000-31508800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
26	chr6:31508000-31509400	Flanking Active TSS	Primary B cells from cord blood	blood
27	chr6:31508000-31510200	Active TSS	Fetal Brain Female	brain
28	chr6:31508000-31510800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
29	chr6:31508000-31511600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr6:31508200-31509000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr6:31508200-31509600	Flanking Active TSS	Adipose Nuclei	Adipose
32	chr6:31508200-31510200	Active TSS	NH-A	brain
33	chr6:31508200-31510800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr6:31508200-31511000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr6:31508200-31511000	Active TSS	NHLF	lung
36	chr6:31508200-31511400	Active TSS	GM12878-XiMat	blood
37	chr6:31508400-31508800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr6:31508400-31508800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
39	chr6:31508400-31508800	Flanking Active TSS	Liver	Liver
40	chr6:31508400-31508800	Flanking Active TSS	Brain Hippocampus Middle	brain
41	chr6:31508400-31508800	Flanking Active TSS	Brain Substantia Nigra	brain
42	chr6:31508400-31508800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
43	chr6:31508400-31508800	Weak transcription	Small Intestine	intestine
44	chr6:31508400-31508800	Weak transcription	Spleen	Spleen
45	chr6:31508400-31509000	Flanking Active TSS	Primary T cells from cord blood	blood
46	chr6:31508400-31509000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
47	chr6:31508400-31509000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
48	chr6:31508400-31509000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
49	chr6:31508400-31509000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr6:31508400-31509000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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