Variant report

Variant rs2523511
Chromosome Location chr6:31506854-31506855
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31496800-31507800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:31497600-31507200 Strong transcription HSMMtube muscle
3 chr6:31497600-31507600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:31497600-31508000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:31497800-31507000 Strong transcription Primary B cells from cord blood blood
6 chr6:31498200-31507600 Strong transcription ES-I3 Cell Line embryonic stem cell
7 chr6:31498600-31507000 Strong transcription iPS-15b Cell Line embryonic stem cell
8 chr6:31502200-31507200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr6:31503800-31507200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
10 chr6:31503800-31508200 Transcr. at gene 5' and 3' GM12878-XiMat blood
11 chr6:31504400-31507800 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr6:31504400-31508400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr6:31505200-31507400 Genic enhancers Primary T helper cells fromperipheralblood blood
14 chr6:31505400-31508000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr6:31505400-31508400 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
16 chr6:31505600-31507200 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr6:31505600-31507200 Genic enhancers Fetal Thymus thymus
18 chr6:31505600-31507800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:31505600-31508400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
20 chr6:31505600-31508800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
21 chr6:31505800-31507000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:31506000-31507000 Genic enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:31506000-31507200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
24 chr6:31506000-31507200 Genic enhancers Stomach Smooth Muscle stomach
25 chr6:31506000-31507400 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr6:31506000-31507600 Genic enhancers Primary T killer naive cells fromperipheralblood blood
27 chr6:31506000-31507800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
28 chr6:31506000-31507800 Genic enhancers Brain Anterior Caudate brain
29 chr6:31506000-31507800 Genic enhancers Brain Hippocampus Middle brain
30 chr6:31506000-31508200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr6:31506000-31508400 Genic enhancers Spleen Spleen
32 chr6:31506000-31508600 Transcr. at gene 5' and 3' Hela-S3 cervix
33 chr6:31506200-31507000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr6:31506200-31507200 Genic enhancers Fetal Kidney kidney
35 chr6:31506200-31507400 Genic enhancers Brain Inferior Temporal Lobe brain
36 chr6:31506200-31507600 Genic enhancers Thymus Thymus
37 chr6:31506200-31507800 Genic enhancers Colon Smooth Muscle Colon
38 chr6:31506200-31507800 Genic enhancers Fetal Intestine Large intestine
39 chr6:31506200-31508000 Transcr. at gene 5' and 3' Fetal Brain Female brain
40 chr6:31506200-31508200 Genic enhancers Small Intestine intestine
41 chr6:31506200-31508400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
42 chr6:31506200-31508800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr6:31506200-31509400 Transcr. at gene 5' and 3' Dnd41 blood
44 chr6:31506400-31507000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:31506400-31507200 Genic enhancers Adipose Nuclei Adipose
46 chr6:31506400-31507200 Genic enhancers HSMM muscle
47 chr6:31506400-31507400 Genic enhancers Cortex derived primary cultured neurospheres brain
48 chr6:31506400-31507600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr6:31506400-31507800 Genic enhancers Primary neutrophils fromperipheralblood blood
50 chr6:31506400-31507800 Genic enhancers Primary mononuclear cells fromperipheralblood Blood

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