Variant report

Variant rs2525088
Chromosome Location chr17:46056995-46056996
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46049600-46059600 Weak transcription Fetal Heart heart
2 chr17:46049800-46058200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr17:46049800-46066600 Weak transcription Small Intestine intestine
4 chr17:46050200-46060400 Strong transcription Fetal Adrenal Gland Adrenal Gland
5 chr17:46050200-46060400 Strong transcription Osteobl bone
6 chr17:46050200-46061800 Strong transcription NHLF lung
7 chr17:46050200-46062000 Strong transcription NHEK skin
8 chr17:46050200-46062200 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr17:46050200-46062800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr17:46050200-46063000 Strong transcription Fetal Muscle Trunk muscle
11 chr17:46050200-46063400 Strong transcription Fetal Stomach stomach
12 chr17:46050400-46058000 Strong transcription Skeletal Muscle Female skeletal muscle
13 chr17:46050400-46060800 Strong transcription Ovary ovary
14 chr17:46050400-46061000 Strong transcription A549 lung
15 chr17:46050400-46061200 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr17:46050400-46061400 Strong transcription HepG2 liver
17 chr17:46050400-46062000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr17:46050400-46062200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr17:46050400-46063000 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr17:46050600-46057000 Strong transcription Dnd41 blood
21 chr17:46050600-46058000 Strong transcription Primary T cells fromperipheralblood blood
22 chr17:46050600-46061800 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr17:46050600-46062200 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr17:46050600-46062200 Strong transcription Primary T regulatory cells fromperipheralblood blood
25 chr17:46050800-46057200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr17:46050800-46057800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr17:46050800-46057800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr17:46050800-46058000 Strong transcription Brain Cingulate Gyrus brain
29 chr17:46050800-46059000 Strong transcription Primary T helper cells fromperipheralblood blood
30 chr17:46050800-46059200 Strong transcription Liver Liver
31 chr17:46050800-46059200 Strong transcription Spleen Spleen
32 chr17:46050800-46059600 Strong transcription Brain Anterior Caudate brain
33 chr17:46050800-46060000 Strong transcription Brain Angular Gyrus brain
34 chr17:46050800-46060200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr17:46050800-46060200 Strong transcription Adipose Nuclei Adipose
36 chr17:46050800-46060200 Strong transcription Gastric stomach
37 chr17:46050800-46060800 Strong transcription Lung lung
38 chr17:46050800-46061000 Strong transcription H1 Cell Line embryonic stem cell
39 chr17:46050800-46061200 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr17:46050800-46061600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr17:46050800-46061600 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr17:46050800-46061800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr17:46050800-46062000 Strong transcription iPS-18 Cell Line embryonic stem cell
44 chr17:46050800-46062000 Strong transcription Primary B cells from peripheral blood blood
45 chr17:46050800-46062200 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr17:46050800-46062400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr17:46050800-46062600 Strong transcription Fetal Intestine Small intestine
48 chr17:46050800-46062800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr17:46050800-46063000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr17:46050800-46063000 Strong transcription Fetal Muscle Leg muscle

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