Variant report

Variant rs2525090
Chromosome Location chr17:46064925-46064926
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46049800-46066600 Weak transcription Small Intestine intestine
2 chr17:46060400-46065200 Weak transcription Osteobl bone
3 chr17:46061000-46065200 Weak transcription Brain Substantia Nigra brain
4 chr17:46061600-46069200 Weak transcription Duodenum Mucosa Duodenum
5 chr17:46061800-46065200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr17:46061800-46065400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr17:46061800-46065800 Weak transcription K562 blood
8 chr17:46061800-46066000 Weak transcription GM12878-XiMat blood
9 chr17:46061800-46066600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr17:46061800-46068200 Weak transcription NHLF lung
11 chr17:46061800-46079600 Weak transcription Right Atrium heart
12 chr17:46062000-46065200 Weak transcription NHEK skin
13 chr17:46062400-46067200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr17:46062800-46065000 Weak transcription Spleen Spleen
15 chr17:46062800-46066200 Weak transcription Fetal Thymus thymus
16 chr17:46063000-46065000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr17:46063000-46065200 Weak transcription Brain Hippocampus Middle brain
18 chr17:46063000-46066600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr17:46063000-46066800 Enhancers Cortex derived primary cultured neurospheres brain
20 chr17:46063000-46068200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr17:46063400-46068600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr17:46063400-46074200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr17:46063600-46065800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr17:46063600-46074600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr17:46063800-46065600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr17:46063800-46065600 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr17:46063800-46065600 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr17:46063800-46065600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr17:46063800-46065800 Enhancers H1 Cell Line embryonic stem cell
30 chr17:46063800-46068800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:46064000-46065200 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr17:46064000-46065200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr17:46064000-46065400 Enhancers ES-WA7 Cell Line embryonic stem cell
34 chr17:46064000-46065400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr17:46064000-46065600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr17:46064000-46065600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr17:46064000-46065600 Enhancers Fetal Brain Male brain
38 chr17:46064000-46065800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr17:46064000-46066400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr17:46064200-46066400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr17:46064200-46071000 Enhancers HSMMtube muscle
42 chr17:46064400-46065200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr17:46064400-46065400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr17:46064400-46065400 Enhancers Muscle Satellite Cultured Cells --
45 chr17:46064400-46065400 Enhancers Duodenum Smooth Muscle Duodenum
46 chr17:46064400-46065400 Enhancers Fetal Kidney kidney
47 chr17:46064400-46065400 Enhancers Stomach Mucosa stomach
48 chr17:46064400-46065600 Enhancers HUES6 Cell Line embryonic stem cell
49 chr17:46064400-46065600 Enhancers Fetal Brain Female brain
50 chr17:46064400-46065600 Enhancers Placenta Placenta

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