Variant report

Variant rs2534561
Chromosome Location chr7:38350275-38350276
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38329800-38351000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr7:38339000-38350400 Enhancers Primary neutrophils fromperipheralblood blood
3 chr7:38345000-38350800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr7:38345600-38350400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr7:38346200-38350400 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr7:38347600-38350400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr7:38348800-38350400 Enhancers Primary T helper cells fromperipheralblood blood
8 chr7:38349000-38350400 Enhancers Primary T cells from cord blood blood
9 chr7:38349600-38350600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
10 chr7:38349800-38350800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr7:38349800-38350800 Enhancers Fetal Lung lung
12 chr7:38350000-38350400 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
13 chr7:38350000-38350400 Enhancers Primary B cells from cord blood blood
14 chr7:38350000-38350400 Enhancers Primary T helper cells PMA-I stimulated --
15 chr7:38350000-38350400 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr7:38350000-38350400 Enhancers Fetal Intestine Large intestine
17 chr7:38350000-38350400 Flanking Active TSS Fetal Kidney kidney
18 chr7:38350000-38350400 Enhancers A549 lung
19 chr7:38350000-38350400 Bivalent Enhancer Osteobl bone
20 chr7:38350000-38350600 Bivalent Enhancer Primary B cells from peripheral blood blood
21 chr7:38350000-38350600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr7:38350000-38350600 Flanking Active TSS Adipose Nuclei Adipose
23 chr7:38350000-38350600 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr7:38350000-38350600 Bivalent Enhancer Fetal Stomach stomach
25 chr7:38350000-38350600 Enhancers Spleen Spleen
26 chr7:38350000-38350600 Enhancers HUVEC blood vessel
27 chr7:38350000-38350800 Enhancers Cortex derived primary cultured neurospheres brain
28 chr7:38350000-38351600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr7:38350000-38351600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
30 chr7:38350200-38350400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr7:38350200-38350400 Flanking Active TSS Primary T cells fromperipheralblood blood
32 chr7:38350200-38350400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr7:38350200-38350400 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr7:38350200-38350400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
35 chr7:38350200-38350400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr7:38350200-38350400 Enhancers Liver Liver
37 chr7:38350200-38350400 Flanking Active TSS Brain Hippocampus Middle brain
38 chr7:38350200-38350400 Enhancers Brain Substantia Nigra brain
39 chr7:38350200-38350400 Enhancers Esophagus oesophagus
40 chr7:38350200-38350400 Enhancers Fetal Intestine Small intestine
41 chr7:38350200-38350400 Flanking Active TSS Fetal Thymus thymus
42 chr7:38350200-38350400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
43 chr7:38350200-38350400 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
44 chr7:38350200-38350400 Enhancers NH-A brain
45 chr7:38350200-38350600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr7:38350200-38350600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr7:38350200-38350600 Enhancers Brain Angular Gyrus brain
48 chr7:38350200-38350600 Enhancers Brain Inferior Temporal Lobe brain
49 chr7:38350200-38350600 Enhancers Duodenum Smooth Muscle Duodenum
50 chr7:38350200-38350600 Enhancers Fetal Muscle Leg muscle

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