Variant report

Variant rs2535410
Chromosome Location chr12:674177-674178
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:649200-678800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr12:652200-675600 Weak transcription H1 Cell Line embryonic stem cell
3 chr12:652400-678600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr12:652400-679000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr12:656200-678600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr12:656400-678400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr12:656600-678400 Weak transcription Brain Anterior Caudate brain
8 chr12:656800-678800 Weak transcription Fetal Brain Female brain
9 chr12:657000-678200 Weak transcription Brain Angular Gyrus brain
10 chr12:657000-678600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr12:661800-678600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr12:662200-677000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr12:662800-678800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr12:663000-678800 Weak transcription H9 Cell Line embryonic stem cell
15 chr12:663400-677400 Weak transcription Fetal Intestine Small intestine
16 chr12:663600-676800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr12:666800-675200 Weak transcription Fetal Heart heart
18 chr12:667800-678800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr12:668000-678800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr12:669400-678600 Weak transcription Stomach Mucosa stomach
21 chr12:670000-679200 Weak transcription Placenta Amnion Placenta Amnion
22 chr12:670400-675200 Strong transcription Brain Inferior Temporal Lobe brain
23 chr12:671000-674600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
24 chr12:671000-675400 Strong transcription Brain Hippocampus Middle brain
25 chr12:671200-674600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
26 chr12:671200-674800 Strong transcription Right Ventricle heart
27 chr12:671200-678800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr12:671400-674400 Weak transcription Lung lung
29 chr12:671400-679200 Weak transcription Aorta Aorta
30 chr12:671600-678600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr12:671600-679000 Weak transcription Right Atrium heart
32 chr12:671800-674200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
33 chr12:671800-674600 Weak transcription Colonic Mucosa Colon
34 chr12:671800-677400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr12:672000-674400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr12:672000-674400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
37 chr12:672200-675200 Enhancers Esophagus oesophagus
38 chr12:672200-675400 Strong transcription Gastric stomach
39 chr12:672400-675200 Strong transcription Brain Cingulate Gyrus brain
40 chr12:672600-674200 Enhancers Primary monocytes fromperipheralblood blood
41 chr12:672600-674200 Enhancers Fetal Muscle Trunk muscle
42 chr12:672800-678600 Weak transcription Fetal Muscle Leg muscle
43 chr12:673000-674400 Enhancers Primary hematopoietic stem cells blood
44 chr12:673000-674400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr12:673000-675400 Flanking Active TSS Primary T cells from cord blood blood
46 chr12:673000-675400 Strong transcription Brain Substantia Nigra brain
47 chr12:673000-678800 Weak transcription K562 blood
48 chr12:673200-674200 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr12:673200-678800 Weak transcription Adipose Nuclei Adipose
50 chr12:673400-674200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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