Variant report

Variant rs2535421
Chromosome Location chr12:684651-684652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:679600-684800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr12:679600-685000 Weak transcription Primary B cells from cord blood blood
3 chr12:679800-684800 Weak transcription Primary B cells from peripheral blood blood
4 chr12:679800-684800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr12:679800-684800 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr12:679800-684800 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr12:679800-684800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr12:679800-684800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr12:679800-684800 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr12:679800-685000 Weak transcription Primary T cells from cord blood blood
11 chr12:679800-685000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr12:679800-685000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr12:679800-685000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr12:679800-685000 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr12:679800-685000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr12:679800-685000 Weak transcription GM12878-XiMat blood
17 chr12:680000-684800 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr12:680000-685000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr12:680000-685400 Weak transcription Fetal Brain Male brain
20 chr12:680200-686000 Enhancers Placenta Placenta
21 chr12:680400-685400 Weak transcription Fetal Brain Female brain
22 chr12:680600-685000 Weak transcription Fetal Intestine Large intestine
23 chr12:680600-685200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr12:680600-685400 Weak transcription Brain Germinal Matrix brain
25 chr12:680800-685200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr12:680800-688000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr12:681000-688000 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr12:681200-684800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr12:681200-685200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr12:681400-684800 Weak transcription Brain Angular Gyrus brain
31 chr12:681400-685000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr12:681400-685000 Weak transcription Duodenum Mucosa Duodenum
33 chr12:681400-685200 Enhancers Adipose Nuclei Adipose
34 chr12:681600-685000 Weak transcription Ovary ovary
35 chr12:681600-685200 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr12:681600-685600 Weak transcription Pancreas Pancrea
37 chr12:681600-687400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr12:681800-684800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr12:681800-685600 Weak transcription Psoas Muscle Psoas
40 chr12:682000-685000 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr12:682000-685000 Weak transcription HUVEC blood vessel
42 chr12:682000-690600 Enhancers HepG2 liver
43 chr12:682000-692800 Weak transcription Gastric stomach
44 chr12:683400-686200 Enhancers Fetal Stomach stomach
45 chr12:683600-685400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr12:683600-685400 Enhancers Osteobl bone
47 chr12:683600-686000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr12:683600-686000 Enhancers HMEC breast
49 chr12:683600-686400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr12:683800-685000 Enhancers Stomach Smooth Muscle stomach

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